About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Single cell mRNA sequencing of primary GBM - SF 10679

We collected fresh tissue from an untreated GBM (SF10679) directly from the operating room and subjected the biopsy to single-cell RNA-seq with the fluidigm C1 machine, resulting in sequencing libraries from 96 individual cells.

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UCSF Brain Tumor Bioinformatics Data Access Policy

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001002185 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00001421323 fastq.gz 34.5 MB Report
EGAF00001421324 fastq.gz 37.3 MB Report
EGAF00001421325 fastq.gz 19.0 MB Report
EGAF00001421326 fastq.gz 21.3 MB Report
EGAF00001421327 fastq.gz 20.3 MB Report
EGAF00001421328 fastq.gz 22.7 MB Report
EGAF00001421329 fastq.gz 14.8 MB Report
EGAF00001421330 fastq.gz 17.1 MB Report
EGAF00001421331 fastq.gz 40.4 MB Report
EGAF00001421332 fastq.gz 44.9 MB Report
EGAF00001421333 fastq.gz 63.4 MB Report
EGAF00001421334 fastq.gz 70.7 MB Report
EGAF00001421335 fastq.gz 47.3 MB Report
EGAF00001421336 fastq.gz 51.9 MB Report
EGAF00001421337 fastq.gz 36.4 MB Report
EGAF00001421338 fastq.gz 41.2 MB Report
EGAF00001421339 fastq.gz 202.4 MB Report
EGAF00001421340 fastq.gz 216.9 MB Report
EGAF00001421341 fastq.gz 36.7 MB Report
EGAF00001421342 fastq.gz 40.9 MB Report
EGAF00001421343 fastq.gz 11.5 MB Report
EGAF00001421344 fastq.gz 13.4 MB Report
EGAF00001421435 fastq.gz 7.8 MB Report
EGAF00001421436 fastq.gz 9.0 MB Report
EGAF00001421437 fastq.gz 90.5 MB Report
EGAF00001421438 fastq.gz 95.3 MB Report
EGAF00001421439 fastq.gz 5.9 MB Report
EGAF00001421440 fastq.gz 6.6 MB Report
EGAF00001421441 fastq.gz 26.1 MB Report
EGAF00001421442 fastq.gz 27.2 MB Report
EGAF00001421443 fastq.gz 928.5 kB Report
EGAF00001421444 fastq.gz 1.0 MB Report
EGAF00001421445 fastq.gz 27.9 MB Report
EGAF00001421446 fastq.gz 30.5 MB Report
EGAF00001421447 fastq.gz 129.4 MB Report
EGAF00001421448 fastq.gz 143.2 MB Report
EGAF00001421449 fastq.gz 77.7 MB Report
EGAF00001421450 fastq.gz 84.0 MB Report
EGAF00001421451 fastq.gz 40.1 MB Report
EGAF00001421452 fastq.gz 43.6 MB Report
EGAF00001421453 fastq.gz 74.7 MB Report
EGAF00001421454 fastq.gz 81.0 MB Report
EGAF00001421455 fastq.gz 26.0 MB Report
EGAF00001421456 fastq.gz 29.3 MB Report
EGAF00001421457 fastq.gz 26.4 MB Report
EGAF00001421458 fastq.gz 28.5 MB Report
EGAF00001421459 fastq.gz 153.1 MB Report
EGAF00001421460 fastq.gz 163.4 MB Report
EGAF00001421461 fastq.gz 1.2 MB Report
EGAF00001421462 fastq.gz 1.2 MB Report
EGAF00001421463 fastq.gz 164.9 MB Report
EGAF00001421464 fastq.gz 176.5 MB Report
EGAF00001421555 fastq.gz 21.1 MB Report
EGAF00001421556 fastq.gz 23.1 MB Report
EGAF00001421557 fastq.gz 18.8 MB Report
EGAF00001421558 fastq.gz 20.8 MB Report
EGAF00001421559 fastq.gz 87.6 MB Report
EGAF00001421560 fastq.gz 90.1 MB Report
EGAF00001421561 fastq.gz 25.7 MB Report
EGAF00001421562 fastq.gz 28.8 MB Report
EGAF00001421563 fastq.gz 80.3 MB Report
EGAF00001421564 fastq.gz 85.0 MB Report
EGAF00001421565 fastq.gz 50.7 MB Report
EGAF00001421566 fastq.gz 54.8 MB Report
EGAF00001421567 fastq.gz 76.5 MB Report
EGAF00001421568 fastq.gz 79.9 MB Report
EGAF00001421569 fastq.gz 15.6 MB Report
EGAF00001421570 fastq.gz 17.4 MB Report
EGAF00001421571 fastq.gz 11.7 MB Report
EGAF00001421572 fastq.gz 13.0 MB Report
EGAF00001421573 fastq.gz 73.2 MB Report
EGAF00001421574 fastq.gz 80.8 MB Report
EGAF00001421575 fastq.gz 723.3 kB Report
EGAF00001421576 fastq.gz 814.7 kB Report
EGAF00001421577 fastq.gz 22.5 MB Report
EGAF00001421578 fastq.gz 25.8 MB Report
EGAF00001421579 fastq.gz 2.9 MB Report
EGAF00001421580 fastq.gz 3.2 MB Report
EGAF00001421581 fastq.gz 16.0 MB Report
EGAF00001421582 fastq.gz 18.1 MB Report
EGAF00001421583 fastq.gz 124.5 MB Report
EGAF00001421584 fastq.gz 139.2 MB Report
EGAF00001421701 fastq.gz 26.9 MB Report
EGAF00001421702 fastq.gz 30.8 MB Report
EGAF00001421703 fastq.gz 155.7 MB Report
EGAF00001421704 fastq.gz 178.3 MB Report
EGAF00001421705 fastq.gz 54.8 MB Report
EGAF00001421706 fastq.gz 62.2 MB Report
EGAF00001421707 fastq.gz 69.6 MB Report
EGAF00001421708 fastq.gz 76.2 MB Report
EGAF00001421709 fastq.gz 74.7 MB Report
EGAF00001421710 fastq.gz 86.3 MB Report
EGAF00001421711 fastq.gz 35.8 MB Report
EGAF00001421712 fastq.gz 42.5 MB Report
EGAF00001421713 fastq.gz 14.4 MB Report
EGAF00001421714 fastq.gz 16.7 MB Report
EGAF00001421715 fastq.gz 5.1 MB Report
EGAF00001421716 fastq.gz 5.3 MB Report
EGAF00001421717 fastq.gz 11.3 MB Report
EGAF00001421718 fastq.gz 12.1 MB Report
EGAF00001421719 fastq.gz 307.1 MB Report
EGAF00001421720 fastq.gz 312.3 MB Report
EGAF00001421721 fastq.gz 190.5 MB Report
EGAF00001421722 fastq.gz 198.6 MB Report
EGAF00001421723 fastq.gz 70.7 MB Report
EGAF00001421724 fastq.gz 74.9 MB Report
EGAF00001421725 fastq.gz 57.9 MB Report
EGAF00001421726 fastq.gz 65.4 MB Report
EGAF00001421727 fastq.gz 79.2 MB Report
EGAF00001421728 fastq.gz 82.4 MB Report
EGAF00001421729 fastq.gz 86.9 MB Report
EGAF00001421730 fastq.gz 93.3 MB Report
EGAF00001421821 fastq.gz 292.8 MB Report
EGAF00001421822 fastq.gz 320.8 MB Report
EGAF00001421823 fastq.gz 304.6 MB Report
EGAF00001421824 fastq.gz 317.3 MB Report
EGAF00001421825 fastq.gz 262.5 MB Report
EGAF00001421826 fastq.gz 272.9 MB Report
EGAF00001421827 fastq.gz 18.8 MB Report
EGAF00001421828 fastq.gz 20.5 MB Report
EGAF00001421829 fastq.gz 59.6 MB Report
EGAF00001421830 fastq.gz 62.4 MB Report
EGAF00001421831 fastq.gz 116.0 MB Report
EGAF00001421832 fastq.gz 124.1 MB Report
EGAF00001421833 fastq.gz 65.0 MB Report
EGAF00001421834 fastq.gz 68.2 MB Report
EGAF00001421835 fastq.gz 59.2 MB Report
EGAF00001421836 fastq.gz 66.8 MB Report
EGAF00001421837 fastq.gz 139.8 MB Report
EGAF00001421838 fastq.gz 151.9 MB Report
EGAF00001421839 fastq.gz 34.8 MB Report
EGAF00001421840 fastq.gz 37.8 MB Report
EGAF00001421841 fastq.gz 282.8 MB Report
EGAF00001421842 fastq.gz 295.7 MB Report
EGAF00001421843 fastq.gz 86.0 MB Report
EGAF00001421844 fastq.gz 93.2 MB Report
EGAF00001421845 fastq.gz 68.0 MB Report
EGAF00001421846 fastq.gz 70.1 MB Report
EGAF00001421847 fastq.gz 23.3 MB Report
EGAF00001421848 fastq.gz 26.3 MB Report
EGAF00001421849 fastq.gz 29.1 MB Report
EGAF00001421850 fastq.gz 31.5 MB Report
EGAF00001421941 fastq.gz 30.9 MB Report
EGAF00001421942 fastq.gz 35.3 MB Report
EGAF00001421943 fastq.gz 207.3 kB Report
EGAF00001421944 fastq.gz 227.4 kB Report
EGAF00001421945 fastq.gz 21.7 MB Report
EGAF00001421946 fastq.gz 22.9 MB Report
EGAF00001421947 fastq.gz 218.2 MB Report
EGAF00001421948 fastq.gz 232.2 MB Report
EGAF00001421949 fastq.gz 68.1 MB Report
EGAF00001421950 fastq.gz 70.5 MB Report
EGAF00001421951 fastq.gz 62.9 MB Report
EGAF00001421952 fastq.gz 65.7 MB Report
EGAF00001421953 fastq.gz 25.8 MB Report
EGAF00001421954 fastq.gz 28.9 MB Report
EGAF00001421955 fastq.gz 143.2 MB Report
EGAF00001421956 fastq.gz 150.1 MB Report
EGAF00001421957 fastq.gz 87.1 MB Report
EGAF00001421958 fastq.gz 92.8 MB Report
EGAF00001421959 fastq.gz 80.5 MB Report
EGAF00001421960 fastq.gz 83.4 MB Report
EGAF00001421961 fastq.gz 34.4 MB Report
EGAF00001421962 fastq.gz 38.7 MB Report
EGAF00001421963 fastq.gz 161.4 MB Report
EGAF00001421964 fastq.gz 171.6 MB Report
EGAF00001421965 fastq.gz 616.5 kB Report
EGAF00001421966 fastq.gz 648.4 kB Report
EGAF00001421967 fastq.gz 8.1 MB Report
EGAF00001421968 fastq.gz 8.3 MB Report
EGAF00001421969 fastq.gz 66.4 MB Report
EGAF00001421970 fastq.gz 69.1 MB Report
EGAF00001422061 fastq.gz 13.7 MB Report
EGAF00001422062 fastq.gz 14.2 MB Report
EGAF00001422063 fastq.gz 39.0 MB Report
EGAF00001422064 fastq.gz 40.8 MB Report
EGAF00001422065 fastq.gz 50.4 MB Report
EGAF00001422066 fastq.gz 53.0 MB Report
EGAF00001422067 fastq.gz 288.0 MB Report
EGAF00001422068 fastq.gz 312.1 MB Report
EGAF00001422069 fastq.gz 109.1 MB Report
EGAF00001422070 fastq.gz 111.9 MB Report
EGAF00001422071 fastq.gz 290.5 MB Report
EGAF00001422072 fastq.gz 317.3 MB Report
EGAF00001422073 fastq.gz 47.3 MB Report
EGAF00001422074 fastq.gz 50.6 MB Report
EGAF00001422075 fastq.gz 31.4 MB Report
EGAF00001422076 fastq.gz 34.8 MB Report
EGAF00001422077 fastq.gz 78.0 MB Report
EGAF00001422078 fastq.gz 86.9 MB Report
EGAF00001422079 fastq.gz 116.8 kB Report
EGAF00001422080 fastq.gz 134.1 kB Report
192 Files (14.6 GB)