About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Single-cell RNA-seq of patient-derived organoids across three generations

Single-cell RNA-seq of first-, second-, and third-generation patient-derived organoids. Obtained using the 10X Genomics single-cell 3' expression solution (v3 chemistry). First- and second-generation PDOs from one patient and first-, second-, and third-generation PDOs from three additional patients.

Request Access

DUO:0000012
version: 2021-02-23

research specific restrictions

This data use modifier indicates that use is limited to studies of a certain research type.

DUO:0000014
version: 2019-01-07

research use only

This data use limitation indicates that use is limited to research purposes (e.g., does not include its use in clinical care).

DUO:0000025
version: 2021-02-23

time limit on use

This data use modifier indicates that use is approved for a specific number of months.

DUO:0000027
version: 2021-02-23

project specific restriction

This data use modifier indicates that use is limited to use within an approved project.

BC Cancer, part of the Provincial Health Services Authority - Data Access Policy

Access to this data is controlled. There are a number of steps that a researcher must take to obtain access to this data, including execution of a Data Access Agreement between the institutions. The process is overseen by the Technology Development Office; please contact our general email address TDOadmin@phsa.ca. Please only click the "request data" button on the EGA website after a Data Access Agreement is fully executed.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005227 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00005742153 fastq.gz 4.0 GB Report
EGAF00005742154 fastq.gz 3.4 GB Report
EGAF00005742155 fastq.gz 3.8 GB Report
EGAF00005742156 fastq.gz 3.4 GB Report
EGAF00005742157 fastq.gz 3.5 GB Report
EGAF00005742158 fastq.gz 3.1 GB Report
EGAF00005742159 fastq.gz 3.9 GB Report
EGAF00005742160 fastq.gz 3.4 GB Report
EGAF00005742161 fastq.gz 4.0 GB Report
EGAF00005742162 fastq.gz 3.5 GB Report
EGAF00005742163 fastq.gz 3.9 GB Report
EGAF00005742164 fastq.gz 3.4 GB Report
EGAF00005742165 fastq.gz 3.9 GB Report
EGAF00005742166 fastq.gz 3.3 GB Report
EGAF00005742167 fastq.gz 3.8 GB Report
EGAF00005742168 fastq.gz 3.2 GB Report
EGAF00005742169 fastq.gz 3.4 GB Report
EGAF00005742170 fastq.gz 2.9 GB Report
EGAF00005742171 fastq.gz 3.6 GB Report
EGAF00005742172 fastq.gz 3.2 GB Report
EGAF00005742173 fastq.gz 3.7 GB Report
EGAF00005742174 fastq.gz 3.3 GB Report
EGAF00005742175 fastq.gz 3.8 GB Report
EGAF00005742176 fastq.gz 3.3 GB Report
EGAF00005742177 fastq.gz 3.6 GB Report
EGAF00005742178 fastq.gz 3.2 GB Report
EGAF00005742179 fastq.gz 3.3 GB Report
EGAF00005742180 fastq.gz 3.0 GB Report
EGAF00005742181 fastq.gz 3.7 GB Report
EGAF00005742182 fastq.gz 3.2 GB Report
EGAF00005742183 fastq.gz 3.8 GB Report
EGAF00005742184 fastq.gz 3.4 GB Report
EGAF00005742185 fastq.gz 3.7 GB Report
EGAF00005742186 fastq.gz 3.3 GB Report
EGAF00005742187 fastq.gz 3.6 GB Report
EGAF00005742188 fastq.gz 3.1 GB Report
EGAF00005742189 fastq.gz 3.6 GB Report
EGAF00005742190 fastq.gz 3.0 GB Report
EGAF00005742191 fastq.gz 3.2 GB Report
EGAF00005742192 fastq.gz 2.8 GB Report
EGAF00005742193 fastq.gz 3.4 GB Report
EGAF00005742194 fastq.gz 3.1 GB Report
EGAF00005742195 fastq.gz 3.6 GB Report
EGAF00005742196 fastq.gz 3.2 GB Report
EGAF00005742197 fastq.gz 3.9 GB Report
EGAF00005742198 fastq.gz 3.4 GB Report
EGAF00005742199 fastq.gz 3.7 GB Report
EGAF00005742200 fastq.gz 3.4 GB Report
EGAF00005742201 fastq.gz 3.4 GB Report
EGAF00005742202 fastq.gz 3.1 GB Report
EGAF00005742203 fastq.gz 3.8 GB Report
EGAF00005742204 fastq.gz 3.3 GB Report
EGAF00005742205 fastq.gz 3.9 GB Report
EGAF00005742206 fastq.gz 3.5 GB Report
EGAF00005742207 fastq.gz 3.8 GB Report
EGAF00005742208 fastq.gz 3.4 GB Report
EGAF00005742209 fastq.gz 3.7 GB Report
EGAF00005742210 fastq.gz 3.2 GB Report
EGAF00005742211 fastq.gz 3.7 GB Report
EGAF00005742212 fastq.gz 3.1 GB Report
EGAF00005742213 fastq.gz 3.3 GB Report
EGAF00005742214 fastq.gz 2.9 GB Report
EGAF00005742215 fastq.gz 3.5 GB Report
EGAF00005742216 fastq.gz 3.2 GB Report
EGAF00005742217 fastq.gz 3.7 GB Report
EGAF00005742218 fastq.gz 3.3 GB Report
EGAF00005742219 fastq.gz 3.6 GB Report
EGAF00005742220 fastq.gz 3.1 GB Report
EGAF00005742221 fastq.gz 3.5 GB Report
EGAF00005742222 fastq.gz 3.1 GB Report
EGAF00005742223 fastq.gz 3.2 GB Report
EGAF00005742224 fastq.gz 2.9 GB Report
EGAF00005742225 fastq.gz 3.6 GB Report
EGAF00005742226 fastq.gz 3.1 GB Report
EGAF00005742227 fastq.gz 3.6 GB Report
EGAF00005742228 fastq.gz 3.2 GB Report
EGAF00005742229 fastq.gz 3.5 GB Report
EGAF00005742230 fastq.gz 3.1 GB Report
EGAF00005742231 fastq.gz 3.5 GB Report
EGAF00005742232 fastq.gz 3.0 GB Report
EGAF00005742233 fastq.gz 3.4 GB Report
EGAF00005742234 fastq.gz 2.9 GB Report
EGAF00005742235 fastq.gz 3.1 GB Report
EGAF00005742236 fastq.gz 2.7 GB Report
EGAF00005742237 fastq.gz 3.3 GB Report
EGAF00005742238 fastq.gz 2.9 GB Report
EGAF00005742239 fastq.gz 3.4 GB Report
EGAF00005742240 fastq.gz 3.0 GB Report
88 Files (298.6 GB)