About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Illumina single-cell RNA sequencing of omentum biopsies of ovarian cancer patients

Illumina Novaseq paired-end single-cell RNA sequencing samples prepared using 10X Genomics platform. 3 ovarian cancer patients, 5 omentum biopsies samples: 3 HGSOC metastasis samples (one per patient), 2 healthy samples (one per patient except Patient2). 4 paired fastq files per sample.

Request Access

DUO:0000007
version: 2021-02-23

disease specific research

This data use permission indicates that use is allowed provided it is related to the specified disease.

ModifiersMONDO:0004992

DUO:0000018
version: 2021-02-23

not for profit, non commercial use only

This data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.

DUO:0000024
version: 2021-02-23

publication moratorium

This data use modifier indicates that requestor agrees not to publish results of studies until a specific date.

DUO:0000045
version: 2021-02-23

not for profit organisation use only

This data use modifier indicates that use of the data is limited to not-for-profit organizations.

DUO:0000046
version: 2021-02-23

non-commercial use only

This data use modifier indicates that use of the data is limited to not-for-profit use.

Data Access Policy of Datasets controlled by MF-DAC

ATTENTION: Please check the following policy and the documents/information to provide in order to get access to the requested datasets. You can find the governing policy on Zenodo under the link: https://zenodo.org/records/12517622 Please provide all information as requested in the document to the MF-DAC. Additionally, you can find more information about the Data Access Committee of the Medical Faculty of the University of Basel (MF-DAC) under the following link on Zenodo: https://zenodo.org/records/10137776

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006807 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00007831910 fastq.gz 199.0 MB Report
EGAF00007831911 fastq.gz 352.7 MB Report
EGAF00007831912 fastq.gz 196.7 MB Report
EGAF00007831913 fastq.gz 354.0 MB Report
EGAF00007831914 fastq.gz 198.3 MB Report
EGAF00007831915 fastq.gz 354.6 MB Report
EGAF00007831916 fastq.gz 198.9 MB Report
EGAF00007831917 fastq.gz 356.1 MB Report
EGAF00007831918 fastq.gz 187.8 MB Report
EGAF00007831919 fastq.gz 334.5 MB Report
EGAF00007831920 fastq.gz 185.6 MB Report
EGAF00007831921 fastq.gz 335.8 MB Report
EGAF00007831922 fastq.gz 187.1 MB Report
EGAF00007831923 fastq.gz 336.4 MB Report
EGAF00007831924 fastq.gz 187.6 MB Report
EGAF00007831925 fastq.gz 337.7 MB Report
EGAF00007831926 fastq.gz 391.4 MB Report
EGAF00007831927 fastq.gz 655.3 MB Report
EGAF00007831928 fastq.gz 391.0 MB Report
EGAF00007831929 fastq.gz 656.1 MB Report
EGAF00007831930 fastq.gz 400.5 MB Report
EGAF00007831931 fastq.gz 669.6 MB Report
EGAF00007831932 fastq.gz 399.1 MB Report
EGAF00007831933 fastq.gz 667.8 MB Report
EGAF00007831934 fastq.gz 564.7 MB Report
EGAF00007831935 fastq.gz 957.4 MB Report
EGAF00007831936 fastq.gz 564.5 MB Report
EGAF00007831937 fastq.gz 959.1 MB Report
EGAF00007831938 fastq.gz 578.2 MB Report
EGAF00007831939 fastq.gz 980.1 MB Report
EGAF00007831940 fastq.gz 576.6 MB Report
EGAF00007831941 fastq.gz 977.4 MB Report
EGAF00007831942 fastq.gz 533.2 MB Report
EGAF00007831943 fastq.gz 900.3 MB Report
EGAF00007831944 fastq.gz 532.9 MB Report
EGAF00007831945 fastq.gz 901.8 MB Report
EGAF00007831946 fastq.gz 545.7 MB Report
EGAF00007831947 fastq.gz 921.4 MB Report
EGAF00007831948 fastq.gz 543.9 MB Report
EGAF00007831949 fastq.gz 918.5 MB Report
40 Files (20.5 GB)