About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Bulk ATAC data

Bulk ATAC libraries were generated for patient samples A.1, A.3, A.5, A.6, A.7, A.11, A.12, A.13 and A.15. For each patient a library of CD3- cells (myeloid cells, considered tumor cells) and CD3+ cells (T cells, considered healthy) were generated.

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Research use only. Project specific restriction

We will share data for scientific research upon reasonably justified requests. Research with the goal of identifying characteristics of the patient not related to the leukemia (such as surname inference and ancestry research) are excluded. The use of the data for projects not related to cancer research is excluded, exceptions may apply in the context of research aiming to develop new bioinformatics methods. Data cannot be made available to 3rd parties and must be stored in an institutional compute system behind a firewall and without world read access; if stored on portable devices, data must be encrypted. Users must present a signed Data Access Agreement available upon request. Terms of the DAA are not negotiable.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001007078 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00008003184 fastq.gz 403.0 MB Report
EGAF00008003185 fastq.gz 400.8 MB Report
EGAF00008003186 fastq.gz 644.9 MB Report
EGAF00008003187 fastq.gz 645.4 MB Report
EGAF00008003188 fastq.gz 526.3 MB Report
EGAF00008003189 fastq.gz 519.7 MB Report
EGAF00008003190 fastq.gz 979.4 MB Report
EGAF00008003191 fastq.gz 873.3 MB Report
EGAF00008003192 fastq.gz 749.9 MB Report
EGAF00008003193 fastq.gz 735.1 MB Report
EGAF00008003194 fastq.gz 1.0 GB Report
EGAF00008003195 fastq.gz 948.5 MB Report
EGAF00008003196 fastq.gz 978.7 MB Report
EGAF00008003197 fastq.gz 1.0 GB Report
EGAF00008003198 fastq.gz 858.1 MB Report
EGAF00008003199 fastq.gz 836.1 MB Report
EGAF00008003200 fastq.gz 1.1 GB Report
EGAF00008003201 fastq.gz 1.1 GB Report
EGAF00008003202 fastq.gz 2.1 GB Report
EGAF00008003203 fastq.gz 2.0 GB Report
EGAF00008003204 fastq.gz 421.6 MB Report
EGAF00008003205 fastq.gz 421.0 MB Report
EGAF00008003206 fastq.gz 702.5 MB Report
EGAF00008003207 fastq.gz 684.5 MB Report
EGAF00008003208 fastq.gz 434.5 MB Report
EGAF00008003209 fastq.gz 431.0 MB Report
EGAF00008003210 fastq.gz 793.3 MB Report
EGAF00008003211 fastq.gz 790.7 MB Report
EGAF00008003212 fastq.gz 983.4 MB Report
EGAF00008003213 fastq.gz 935.4 MB Report
EGAF00008003214 fastq.gz 2.4 GB Report
EGAF00008003215 fastq.gz 2.1 GB Report
EGAF00008003216 fastq.gz 809.3 MB Report
EGAF00008003217 fastq.gz 751.0 MB Report
EGAF00008003218 fastq.gz 2.5 GB Report
EGAF00008003219 fastq.gz 2.3 GB Report
36 Files (35.9 GB)