Poland Lower Silesian Voivodeship - WGS
This project used NGS (next generation sequencing), using Illumina NOVASEQ 6000 and Illumina DRAGEN aligner. The dataset includes BAM and BAM.BAI files from Whole Genome Sequencing of 30 samples (15 female, 15 male of Lower Silesian Voivodeship, Poland from POPULOUS collection). Library Construction Protocol: Illumina DNA PCR-Free Prep, Tagmentation. Reference Genome: GRCh37.
- 27/12/2023
- 30 samples
- DAC: EGAC50000000080
DUO:0000026 version: 2021-02-23
user specific restriction
This data use modifier indicates that use is limited to use by approved users.
DUO:0000027 version: 2021-02-23
project specific restriction
This data use modifier indicates that use is limited to use within an approved project.
DUO:0000028 version: 2021-02-23
institution specific restriction
This data use modifier indicates that use is limited to use within an approved institution.
DUO:0000042 version: 2021-02-23
general research use
This data use permission indicates that use is allowed for general research use for any research purpose.
DUO:0000046 version: 2021-02-23
non-commercial use only
This data use modifier indicates that use of the data is limited to not-for-profit use.
Genomic map of Poland policy
Access to data generated by Biobank Lab at the Department of Oncobiology and Epigenetics, University of Lodz is available by application to the data access committee and will be granted to qualified investigators for appropriate use
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000000091 | Whole Genome Sequencing |
- Changed reference to study in experiments and analyses. Added new informations to the dataset description.
- Dataset Released
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
i
|
|---|---|---|---|---|
| EGAF50000059517 | bai | 9.0 MB |
Federated EGA
|
|
| EGAF50000059519 | bai | 9.0 MB |
Federated EGA
|
|
| EGAF50000059521 | bai | 9.0 MB |
Federated EGA
|
|
| EGAF50000059522 | bai | 9.0 MB |
Federated EGA
|
|
| EGAF50000059524 | bai | 9.0 MB |
Federated EGA
|
|
| EGAF50000059525 | bai | 9.2 MB |
Federated EGA
|
|
| EGAF50000059526 | bai | 8.9 MB |
Federated EGA
|
|
| EGAF50000059528 | bai | 9.0 MB |
Federated EGA
|
|
| EGAF50000059529 | bai | 9.0 MB |
Federated EGA
|
|
| EGAF50000059531 | bam | 69.8 GB |
Federated EGA
|
|
| EGAF50000059533 | bam | 66.3 GB |
Federated EGA
|
|
| EGAF50000059534 | bai | 8.9 MB |
Federated EGA
|
|
| EGAF50000059535 | bai | 9.3 MB |
Federated EGA
|
|
| EGAF50000059536 | bam | 63.6 GB |
Federated EGA
|
|
| EGAF50000059537 | bam | 78.0 GB |
Federated EGA
|
|
| EGAF50000059538 | bai | 9.0 MB |
Federated EGA
|
|
| EGAF50000059539 | bai | 9.0 MB |
Federated EGA
|
|
| EGAF50000059540 | bam | 56.5 GB |
Federated EGA
|
|
| EGAF50000059541 | bai | 9.0 MB |
Federated EGA
|
|
| EGAF50000059542 | bai | 9.0 MB |
Federated EGA
|
|
| EGAF50000059543 | bam | 56.6 GB |
Federated EGA
|
|
| EGAF50000059544 | bam | 93.2 GB |
Federated EGA
|
|
| EGAF50000059545 | bam | 42.3 GB |
Federated EGA
|
|
| EGAF50000059546 | bai | 8.9 MB |
Federated EGA
|
|
| EGAF50000059547 | bam | 51.3 GB |
Federated EGA
|
|
| EGAF50000059548 | bai | 8.9 MB |
Federated EGA
|
|
| EGAF50000059549 | bai | 8.9 MB |
Federated EGA
|
|
| EGAF50000059550 | bam | 96.5 GB |
Federated EGA
|
|
| EGAF50000059551 | bai | 9.0 MB |
Federated EGA
|
|
| EGAF50000059552 | bam | 50.3 GB |
Federated EGA
|
|
| EGAF50000059553 | bai | 9.0 MB |
Federated EGA
|
|
| EGAF50000059554 | bam | 53.5 GB |
Federated EGA
|
|
| EGAF50000059555 | bai | 9.0 MB |
Federated EGA
|
|
| EGAF50000059556 | bam | 58.7 GB |
Federated EGA
|
|
| EGAF50000059557 | bai | 9.0 MB |
Federated EGA
|
|
| EGAF50000059558 | bam | 63.3 GB |
Federated EGA
|
|
| EGAF50000059559 | bam | 50.3 GB |
Federated EGA
|
|
| EGAF50000059560 | bai | 9.2 MB |
Federated EGA
|
|
| EGAF50000059561 | bam | 116.2 GB |
Federated EGA
|
|
| EGAF50000059562 | bai | 9.0 MB |
Federated EGA
|
|
| EGAF50000059563 | bai | 9.0 MB |
Federated EGA
|
|
| EGAF50000059564 | bai | 9.0 MB |
Federated EGA
|
|
| EGAF50000059565 | bam | 91.4 GB |
Federated EGA
|
|
| EGAF50000059566 | bam | 51.3 GB |
Federated EGA
|
|
| EGAF50000059567 | bai | 9.0 MB |
Federated EGA
|
|
| EGAF50000059568 | bam | 59.2 GB |
Federated EGA
|
|
| EGAF50000059569 | bai | 9.0 MB |
Federated EGA
|
|
| EGAF50000059570 | bam | 55.5 GB |
Federated EGA
|
|
| EGAF50000059571 | bai | 8.9 MB |
Federated EGA
|
|
| EGAF50000059572 | bai | 8.9 MB |
Federated EGA
|
|
| EGAF50000059573 | bam | 74.9 GB |
Federated EGA
|
|
| EGAF50000059574 | bam | 53.6 GB |
Federated EGA
|
|
| EGAF50000059575 | bam | 76.4 GB |
Federated EGA
|
|
| EGAF50000059576 | bam | 85.5 GB |
Federated EGA
|
|
| EGAF50000059577 | bam | 63.9 GB |
Federated EGA
|
|
| EGAF50000059578 | bam | 57.5 GB |
Federated EGA
|
|
| EGAF50000059579 | bam | 82.0 GB |
Federated EGA
|
|
| EGAF50000059580 | bam | 66.4 GB |
Federated EGA
|
|
| EGAF50000059581 | bam | 70.9 GB |
Federated EGA
|
|
| EGAF50000059582 | bam | 97.3 GB |
Federated EGA
|
|
| 60 Files (2.1 TB) | ||||