About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Poland Subcarpathian Voivodeship - WGS

This project used NGS (next generation sequencing), using Illumina NOVASEQ 6000 and Illumina DRAGEN aligner. The dataset includes BAM and BAM.BAI files from Whole Genome Sequencing of 22 samples (11 female, 11 male of Subcarpathian Voivodeship, Poland from POPULOUS collection). Library Construction Protocol: Illumina DNA PCR-Free Prep, Tagmentation. Reference Genome: GRCh37.

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DUO:0000026
version: 2021-02-23

user specific restriction

This data use modifier indicates that use is limited to use by approved users.

DUO:0000027
version: 2021-02-23

project specific restriction

This data use modifier indicates that use is limited to use within an approved project.

DUO:0000028
version: 2021-02-23

institution specific restriction

This data use modifier indicates that use is limited to use within an approved institution.

DUO:0000042
version: 2021-02-23

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

DUO:0000046
version: 2021-02-23

non-commercial use only

This data use modifier indicates that use of the data is limited to not-for-profit use.

Genomic map of Poland policy

Access to data generated by Biobank Lab at the Department of Oncobiology and Epigenetics, University of Lodz is available by application to the data access committee and will be granted to qualified investigators for appropriate use

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000091 Whole Genome Sequencing
  • Changed reference to study in experiments and analyses. Added new informations to the dataset description.
  • Dataset Released

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000059622 bai 8.9 MB
Federated EGA
EGAF50000059623 bai 9.1 MB
Federated EGA
EGAF50000059624 bai 9.0 MB
Federated EGA
EGAF50000059625 bai 9.0 MB
Federated EGA
EGAF50000059626 bai 9.0 MB
Federated EGA
EGAF50000059627 bai 9.2 MB
Federated EGA
EGAF50000059630 bai 9.0 MB
Federated EGA
EGAF50000059632 bai 8.9 MB
Federated EGA
EGAF50000059633 bai 9.0 MB
Federated EGA
EGAF50000059635 bai 9.0 MB
Federated EGA
EGAF50000059636 bai 8.9 MB
Federated EGA
EGAF50000059637 bam 49.3 GB
Federated EGA
EGAF50000059638 bam 54.7 GB
Federated EGA
EGAF50000059639 bai 9.0 MB
Federated EGA
EGAF50000059640 bai 9.1 MB
Federated EGA
EGAF50000059641 bam 60.8 GB
Federated EGA
EGAF50000059642 bam 62.0 GB
Federated EGA
EGAF50000059643 bai 8.9 MB
Federated EGA
EGAF50000059644 bai 9.1 MB
Federated EGA
EGAF50000059645 bam 79.1 GB
Federated EGA
EGAF50000059646 bam 63.1 GB
Federated EGA
EGAF50000059647 bai 9.0 MB
Federated EGA
EGAF50000059648 bam 58.6 GB
Federated EGA
EGAF50000059649 bai 9.3 MB
Federated EGA
EGAF50000059650 bai 9.1 MB
Federated EGA
EGAF50000059651 bam 91.5 GB
Federated EGA
EGAF50000059652 bam 45.0 GB
Federated EGA
EGAF50000059653 bai 9.1 MB
Federated EGA
EGAF50000059654 bai 9.0 MB
Federated EGA
EGAF50000059655 bam 54.8 GB
Federated EGA
EGAF50000059656 bam 64.5 GB
Federated EGA
EGAF50000059657 bam 44.0 GB
Federated EGA
EGAF50000059658 bam 65.2 GB
Federated EGA
EGAF50000059659 bai 8.9 MB
Federated EGA
EGAF50000059660 bai 9.0 MB
Federated EGA
EGAF50000059661 bam 68.5 GB
Federated EGA
EGAF50000059662 bam 79.3 GB
Federated EGA
EGAF50000059663 bam 67.6 GB
Federated EGA
EGAF50000059664 bam 71.6 GB
Federated EGA
EGAF50000059665 bam 49.0 GB
Federated EGA
EGAF50000059666 bam 64.7 GB
Federated EGA
EGAF50000059667 bam 82.8 GB
Federated EGA
EGAF50000059668 bam 106.2 GB
Federated EGA
EGAF50000059669 bam 117.0 GB
Federated EGA
44 Files (1.5 TB)