About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Bulk transcriptomic analyses of monocyte-derived dendritic cells treated with CES1i

The data published here contains bulk RNA-sequencing (RNAseq) data as obtainedfrom monocyte-derived dendritic cells in treated with/without LPS and with/without CESi (WWL113). Sequencing was performed in a paired-ended fashion on the NovaSeq6000.

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Data Access Policy Tytgat Institute AmsterdamUMC

Access requests undergo a comprehensive review by the Data Access Committee of Tytgat Institute for Liver and Intestinal Research, Amsterdam UMC (DAC-TI). Request will only be granted to qualified users for appropriate use. Applicants are required to submit detailed proposals outlining the purpose, methodology, and ethical considerations of their research. Procedure: 1) The Applicant sends a data access request through European Genome-phenome Archive (EGA) to the DAC-TI. 2) Upon submission, a representative of the DAC-TI will send a Data Request Form (DRF) to the Application. Upon completing the DRF, this form must be returned to the DAC-TI whereupon the evaluation process will commence. 3) When a request is positively evaluated, the applicant will be asked to sign the Data Sharing Agreement. Review and Conditions: - Each DRF is assessed based on the scientific profile of the applicants, the scientific merit, ethical implications, data security plans, and compliance with the relevant regulations, within a specified timeframe. - The DAC-TI reserves the right to conduct periodic reviews to ensure responsible data use. - Approval is contingent on meeting the criteria and compliance with relevant regulations.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000230 Transcriptome Analysis

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000089603 fastq.gz 4.5 GB Report
EGAF50000089604 fastq.gz 4.6 GB Report
EGAF50000089605 fastq.gz 1.2 GB Report
EGAF50000089606 fastq.gz 1.1 GB Report
EGAF50000089607 fastq.gz 8.4 GB Report
EGAF50000089608 fastq.gz 8.6 GB Report
EGAF50000089609 fastq.gz 4.5 GB Report
EGAF50000089610 fastq.gz 4.4 GB Report
EGAF50000089611 fastq.gz 4.1 GB Report
EGAF50000089612 fastq.gz 3.9 GB Report
EGAF50000089613 fastq.gz 6.8 GB Report
EGAF50000089614 fastq.gz 6.5 GB Report
EGAF50000089615 fastq.gz 3.5 GB Report
EGAF50000089616 fastq.gz 3.7 GB Report
EGAF50000089617 fastq.gz 4.3 GB Report
EGAF50000089618 fastq.gz 4.5 GB Report
EGAF50000089619 fastq.gz 3.1 GB Report
EGAF50000089620 fastq.gz 3.1 GB Report
EGAF50000089621 fastq.gz 5.3 GB Report
EGAF50000089622 fastq.gz 5.1 GB Report
EGAF50000089623 fastq.gz 7.6 GB Report
EGAF50000089624 fastq.gz 7.3 GB Report
EGAF50000089625 fastq.gz 4.5 GB Report
EGAF50000089626 fastq.gz 4.5 GB Report
EGAF50000089627 fastq.gz 7.2 GB Report
EGAF50000089628 fastq.gz 7.4 GB Report
EGAF50000089629 fastq.gz 7.9 GB Report
EGAF50000089630 fastq.gz 7.6 GB Report
EGAF50000089631 fastq.gz 5.2 GB Report
EGAF50000089632 fastq.gz 5.4 GB Report
EGAF50000089633 fastq.gz 1.8 GB Report
EGAF50000089634 fastq.gz 1.7 GB Report
EGAF50000089635 fastq.gz 5.0 GB Report
EGAF50000089636 fastq.gz 5.1 GB Report
EGAF50000089637 fastq.gz 4.1 GB Report
EGAF50000089638 fastq.gz 4.2 GB Report
EGAF50000089639 fastq.gz 920.6 MB Report
EGAF50000089640 fastq.gz 874.0 MB Report
EGAF50000089641 fastq.gz 8.5 GB Report
EGAF50000089642 fastq.gz 8.3 GB Report
EGAF50000089643 fastq.gz 8.2 GB Report
EGAF50000089644 fastq.gz 8.5 GB Report
EGAF50000089645 fastq.gz 4.3 GB Report
EGAF50000089646 fastq.gz 4.5 GB Report
EGAF50000089647 fastq.gz 3.7 GB Report
EGAF50000089648 fastq.gz 3.9 GB Report
EGAF50000089649 fastq.gz 5.6 GB Report
EGAF50000089650 fastq.gz 5.5 GB Report
48 Files (240.4 GB)