About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Complex-I stratification of Parkinson's disease in the prefrontal cortex - bulk RNA seq

Dataset corresponding to the bulk RNA seq dataset from prefrontal cortex for a total of N=98 samples. Tissue samples correspond to patients with idiopathic Parkison's disease (PD) with varying levels of Complex-I activity (N=79) and neurologically healthy controls (N=19). RNA seq was carried out using ribosomal depletion. A subset of these samples was additionally sequenced using single nucleus RNA seq and is available in the same Study as an additional Dataset.

Request Access

DUO:0000006
version: 2021-02-23

health or medical or biomedical research

This data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.

DUO:0000020
version: 2021-02-23

collaboration required

This data use modifier indicates that the requestor must agree to collaboration with the primary study investigator(s).

DUO:0000021
version: 2021-02-23

ethics approval required

This data use modifier indicates that the requestor must provide documentation of local IRB/ERB approval.

DUO:0000025
version: 2021-02-23

time limit on use

This data use modifier indicates that use is approved for a specific number of months.

DUO:0000027
version: 2021-02-23

project specific restriction

This data use modifier indicates that use is limited to use within an approved project.

DUO:0000028
version: 2021-02-23

institution specific restriction

This data use modifier indicates that use is limited to use within an approved institution.

Haukeland University Hospital Data Access Policy for ParkOme-1: omics of Parkinson’s disease and related disorders datasets archived in Federated EGA Norway

1. Data Access Committee A Data Access Committee (DAC) is a body of one or more named individuals who are responsible for data release to external requesters based on consent and/or National Research Ethics terms. Each dataset submitted by Haukeland University Hospital for archival and controlled access sharing in Federated EGA Norway, has a DAC appointed by Haukeland University Hospital to govern controlled access to the dataset according to this Data Access Policy. Multiple datasets may be affiliated to a single DAC. Haukeland University Hospital as an institution has the overall data controller responsibility, and has appointed a DAC based on proper internal procedures that ensures involvement of institutional functions such as Data Protection Officer, legal control, etc. 2. Data use conditions To advise any would-be requester on how the data can be used, Data Use Ontology codes (DUO) is associated to each dataset, providing the requester more insights into which terms for sharing and use of the data that applies, and that needs to be addressed as part of the communication with the DAC in a data access request. No access to an Haukeland University Hospital dataset deposited in FEGA Norway can be granted to a requester before all applicable conditions and requirements for the use and management of the data have been agreed upon in a signed Data Access Agreement. 3. Data Access Agreement The Data Access Agreement (DAA) will include requirements specific for both the dataset and the management of the data in the hands of the requester applying for access, and will thus be an individual DAA for each case of granted access to a dataset. As a rule, a DAA for an Haukeland University Hospital dataset will take the form of a Data Transfer Agreement, where the requester will commit to take on responsibilities and duties as a data controller. 4. Processing of requests for access The overall data access approval process at Haukeland University Hospital can be summarized as follows: ● DAC for an Haukeland University Hospital dataset is contacted by a potential data requester ● DAC continues communication with requester to understand the purpose of use, i.e. research setting the dataset is envisioned for by requester, to identify if data sharing is possible directly under current conditions for the dataset, or actions such as re-consenting is needed and desirable to accommodate the proposed research setting/data use. ● A Data Access Agreement is jointly formulated and agreed upon, with the DAC following internal Haukeland University Hospital procedure to include the Data Protection Officer and Division for research support. ● When a completed DAA has been signed between the parties, and archived at Haukeland University Hospital, the DAC will instruct the FEGA Norway node to release the data to the requester.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000301 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000099783 fastq.gz 5.5 GB
Federated EGA
EGAF50000099784 fastq.gz 5.6 GB
Federated EGA
EGAF50000099785 fastq.gz 6.9 GB
Federated EGA
EGAF50000099786 fastq.gz 7.0 GB
Federated EGA
EGAF50000099787 fastq.gz 6.4 GB
Federated EGA
EGAF50000099788 fastq.gz 6.5 GB
Federated EGA
EGAF50000099789 fastq.gz 5.4 GB
Federated EGA
EGAF50000099790 fastq.gz 5.5 GB
Federated EGA
EGAF50000099791 fastq.gz 6.5 GB
Federated EGA
EGAF50000099792 fastq.gz 6.7 GB
Federated EGA
EGAF50000099793 fastq.gz 6.6 GB
Federated EGA
EGAF50000099794 fastq.gz 6.9 GB
Federated EGA
EGAF50000099795 fastq.gz 7.6 GB
Federated EGA
EGAF50000099796 fastq.gz 7.8 GB
Federated EGA
EGAF50000099797 fastq.gz 7.2 GB
Federated EGA
EGAF50000099798 fastq.gz 7.4 GB
Federated EGA
EGAF50000099799 fastq.gz 7.1 GB
Federated EGA
EGAF50000099800 fastq.gz 7.4 GB
Federated EGA
EGAF50000099801 fastq.gz 6.6 GB
Federated EGA
EGAF50000099802 fastq.gz 6.8 GB
Federated EGA
EGAF50000099803 fastq.gz 6.6 GB
Federated EGA
EGAF50000099804 fastq.gz 6.8 GB
Federated EGA
EGAF50000099805 fastq.gz 6.9 GB
Federated EGA
EGAF50000099806 fastq.gz 7.2 GB
Federated EGA
EGAF50000099807 fastq.gz 6.4 GB
Federated EGA
EGAF50000099808 fastq.gz 6.5 GB
Federated EGA
EGAF50000099809 fastq.gz 6.7 GB
Federated EGA
EGAF50000099810 fastq.gz 6.9 GB
Federated EGA
EGAF50000099811 fastq.gz 6.1 GB
Federated EGA
EGAF50000099812 fastq.gz 6.3 GB
Federated EGA
EGAF50000099813 fastq.gz 7.0 GB
Federated EGA
EGAF50000099814 fastq.gz 7.1 GB
Federated EGA
EGAF50000099815 fastq.gz 6.2 GB
Federated EGA
EGAF50000099816 fastq.gz 6.3 GB
Federated EGA
EGAF50000099817 fastq.gz 5.9 GB
Federated EGA
EGAF50000099818 fastq.gz 6.2 GB
Federated EGA
EGAF50000099819 fastq.gz 6.2 GB
Federated EGA
EGAF50000099820 fastq.gz 6.4 GB
Federated EGA
EGAF50000099821 fastq.gz 7.1 GB
Federated EGA
EGAF50000099822 fastq.gz 7.3 GB
Federated EGA
EGAF50000099823 fastq.gz 6.6 GB
Federated EGA
EGAF50000099824 fastq.gz 6.7 GB
Federated EGA
EGAF50000099825 fastq.gz 6.5 GB
Federated EGA
EGAF50000099826 fastq.gz 6.7 GB
Federated EGA
EGAF50000099827 fastq.gz 6.2 GB
Federated EGA
EGAF50000099828 fastq.gz 6.3 GB
Federated EGA
EGAF50000099829 fastq.gz 7.2 GB
Federated EGA
EGAF50000099830 fastq.gz 7.4 GB
Federated EGA
EGAF50000099831 fastq.gz 6.2 GB
Federated EGA
EGAF50000099832 fastq.gz 6.3 GB
Federated EGA
EGAF50000099833 fastq.gz 7.2 GB
Federated EGA
EGAF50000099834 fastq.gz 7.3 GB
Federated EGA
EGAF50000099835 fastq.gz 6.0 GB
Federated EGA
EGAF50000099836 fastq.gz 6.2 GB
Federated EGA
EGAF50000099837 fastq.gz 6.6 GB
Federated EGA
EGAF50000099838 fastq.gz 6.8 GB
Federated EGA
EGAF50000099839 fastq.gz 7.1 GB
Federated EGA
EGAF50000099840 fastq.gz 7.3 GB
Federated EGA
EGAF50000099841 fastq.gz 6.1 GB
Federated EGA
EGAF50000099842 fastq.gz 6.4 GB
Federated EGA
EGAF50000099843 fastq.gz 7.2 GB
Federated EGA
EGAF50000099844 fastq.gz 7.3 GB
Federated EGA
EGAF50000099845 fastq.gz 8.2 GB
Federated EGA
EGAF50000099846 fastq.gz 8.3 GB
Federated EGA
EGAF50000099847 fastq.gz 6.5 GB
Federated EGA
EGAF50000099848 fastq.gz 6.6 GB
Federated EGA
EGAF50000099849 fastq.gz 6.9 GB
Federated EGA
EGAF50000099850 fastq.gz 7.0 GB
Federated EGA
EGAF50000099851 fastq.gz 5.6 GB
Federated EGA
EGAF50000099852 fastq.gz 5.7 GB
Federated EGA
EGAF50000099853 fastq.gz 8.0 GB
Federated EGA
EGAF50000099854 fastq.gz 8.2 GB
Federated EGA
EGAF50000099855 fastq.gz 6.8 GB
Federated EGA
EGAF50000099856 fastq.gz 6.9 GB
Federated EGA
EGAF50000099857 fastq.gz 7.2 GB
Federated EGA
EGAF50000099858 fastq.gz 7.4 GB
Federated EGA
EGAF50000099859 fastq.gz 7.1 GB
Federated EGA
EGAF50000099860 fastq.gz 7.2 GB
Federated EGA
EGAF50000099861 fastq.gz 7.4 GB
Federated EGA
EGAF50000099862 fastq.gz 7.5 GB
Federated EGA
EGAF50000099863 fastq.gz 6.2 GB
Federated EGA
EGAF50000099864 fastq.gz 6.4 GB
Federated EGA
EGAF50000099865 fastq.gz 5.5 GB
Federated EGA
EGAF50000099866 fastq.gz 5.6 GB
Federated EGA
EGAF50000099867 fastq.gz 5.9 GB
Federated EGA
EGAF50000099868 fastq.gz 6.2 GB
Federated EGA
EGAF50000099869 fastq.gz 5.3 GB
Federated EGA
EGAF50000099870 fastq.gz 5.5 GB
Federated EGA
EGAF50000099871 fastq.gz 6.1 GB
Federated EGA
EGAF50000099872 fastq.gz 6.1 GB
Federated EGA
EGAF50000099873 fastq.gz 6.7 GB
Federated EGA
EGAF50000099874 fastq.gz 6.8 GB
Federated EGA
EGAF50000099875 fastq.gz 8.6 GB
Federated EGA
EGAF50000099876 fastq.gz 8.8 GB
Federated EGA
EGAF50000099877 fastq.gz 7.2 GB
Federated EGA
EGAF50000099878 fastq.gz 7.4 GB
Federated EGA
EGAF50000099879 fastq.gz 7.4 GB
Federated EGA
EGAF50000099880 fastq.gz 7.7 GB
Federated EGA
EGAF50000099881 fastq.gz 7.2 GB
Federated EGA
EGAF50000099882 fastq.gz 7.3 GB
Federated EGA
EGAF50000099883 fastq.gz 7.5 GB
Federated EGA
EGAF50000099884 fastq.gz 7.7 GB
Federated EGA
EGAF50000099885 fastq.gz 6.7 GB
Federated EGA
EGAF50000099886 fastq.gz 6.9 GB
Federated EGA
EGAF50000099887 fastq.gz 6.5 GB
Federated EGA
EGAF50000099888 fastq.gz 6.8 GB
Federated EGA
EGAF50000099889 fastq.gz 8.7 GB
Federated EGA
EGAF50000099890 fastq.gz 9.0 GB
Federated EGA
EGAF50000099891 fastq.gz 7.4 GB
Federated EGA
EGAF50000099892 fastq.gz 7.5 GB
Federated EGA
EGAF50000099893 fastq.gz 7.1 GB
Federated EGA
EGAF50000099894 fastq.gz 7.3 GB
Federated EGA
EGAF50000099895 fastq.gz 7.2 GB
Federated EGA
EGAF50000099896 fastq.gz 7.5 GB
Federated EGA
EGAF50000099897 fastq.gz 6.3 GB
Federated EGA
EGAF50000099898 fastq.gz 6.6 GB
Federated EGA
EGAF50000099899 fastq.gz 6.5 GB
Federated EGA
EGAF50000099900 fastq.gz 6.7 GB
Federated EGA
EGAF50000099901 fastq.gz 7.4 GB
Federated EGA
EGAF50000099902 fastq.gz 7.5 GB
Federated EGA
EGAF50000099903 fastq.gz 7.9 GB
Federated EGA
EGAF50000099904 fastq.gz 8.1 GB
Federated EGA
EGAF50000099905 fastq.gz 6.3 GB
Federated EGA
EGAF50000099906 fastq.gz 6.4 GB
Federated EGA
EGAF50000099907 fastq.gz 6.6 GB
Federated EGA
EGAF50000099908 fastq.gz 6.7 GB
Federated EGA
EGAF50000099909 fastq.gz 6.8 GB
Federated EGA
EGAF50000099910 fastq.gz 6.9 GB
Federated EGA
EGAF50000099911 fastq.gz 7.1 GB
Federated EGA
EGAF50000099912 fastq.gz 7.4 GB
Federated EGA
EGAF50000099913 fastq.gz 7.1 GB
Federated EGA
EGAF50000099914 fastq.gz 7.3 GB
Federated EGA
EGAF50000099915 fastq.gz 6.5 GB
Federated EGA
EGAF50000099916 fastq.gz 6.7 GB
Federated EGA
EGAF50000099917 fastq.gz 7.6 GB
Federated EGA
EGAF50000099918 fastq.gz 7.7 GB
Federated EGA
EGAF50000099919 fastq.gz 7.1 GB
Federated EGA
EGAF50000099920 fastq.gz 7.3 GB
Federated EGA
EGAF50000099921 fastq.gz 8.7 GB
Federated EGA
EGAF50000099922 fastq.gz 9.1 GB
Federated EGA
EGAF50000099923 fastq.gz 7.1 GB
Federated EGA
EGAF50000099924 fastq.gz 7.3 GB
Federated EGA
EGAF50000099925 fastq.gz 7.6 GB
Federated EGA
EGAF50000099926 fastq.gz 7.7 GB
Federated EGA
EGAF50000099927 fastq.gz 7.6 GB
Federated EGA
EGAF50000099928 fastq.gz 7.9 GB
Federated EGA
EGAF50000099929 fastq.gz 8.4 GB
Federated EGA
EGAF50000099930 fastq.gz 8.7 GB
Federated EGA
EGAF50000099931 fastq.gz 6.4 GB
Federated EGA
EGAF50000099932 fastq.gz 6.5 GB
Federated EGA
EGAF50000099933 fastq.gz 8.0 GB
Federated EGA
EGAF50000099934 fastq.gz 8.3 GB
Federated EGA
EGAF50000099935 fastq.gz 7.2 GB
Federated EGA
EGAF50000099936 fastq.gz 7.4 GB
Federated EGA
EGAF50000099937 fastq.gz 7.5 GB
Federated EGA
EGAF50000099938 fastq.gz 7.8 GB
Federated EGA
EGAF50000099939 fastq.gz 7.6 GB
Federated EGA
EGAF50000099940 fastq.gz 7.7 GB
Federated EGA
EGAF50000099941 fastq.gz 7.3 GB
Federated EGA
EGAF50000099942 fastq.gz 7.5 GB
Federated EGA
EGAF50000099943 fastq.gz 7.2 GB
Federated EGA
EGAF50000099944 fastq.gz 7.2 GB
Federated EGA
EGAF50000099945 fastq.gz 8.0 GB
Federated EGA
EGAF50000099946 fastq.gz 8.3 GB
Federated EGA
EGAF50000099947 fastq.gz 7.8 GB
Federated EGA
EGAF50000099948 fastq.gz 8.1 GB
Federated EGA
EGAF50000099949 fastq.gz 6.7 GB
Federated EGA
EGAF50000099950 fastq.gz 6.9 GB
Federated EGA
EGAF50000099951 fastq.gz 6.8 GB
Federated EGA
EGAF50000099952 fastq.gz 7.1 GB
Federated EGA
EGAF50000099953 fastq.gz 7.4 GB
Federated EGA
EGAF50000099954 fastq.gz 7.8 GB
Federated EGA
EGAF50000099955 fastq.gz 5.7 GB
Federated EGA
EGAF50000099956 fastq.gz 5.9 GB
Federated EGA
EGAF50000099957 fastq.gz 7.9 GB
Federated EGA
EGAF50000099958 fastq.gz 8.1 GB
Federated EGA
EGAF50000099959 fastq.gz 8.5 GB
Federated EGA
EGAF50000099960 fastq.gz 8.7 GB
Federated EGA
EGAF50000099961 fastq.gz 6.4 GB
Federated EGA
EGAF50000099962 fastq.gz 6.7 GB
Federated EGA
EGAF50000099963 fastq.gz 5.4 GB
Federated EGA
EGAF50000099964 fastq.gz 5.6 GB
Federated EGA
EGAF50000099965 fastq.gz 7.0 GB
Federated EGA
EGAF50000099966 fastq.gz 7.2 GB
Federated EGA
EGAF50000099967 fastq.gz 6.3 GB
Federated EGA
EGAF50000099968 fastq.gz 6.6 GB
Federated EGA
EGAF50000099969 fastq.gz 5.8 GB
Federated EGA
EGAF50000099970 fastq.gz 5.9 GB
Federated EGA
EGAF50000099971 fastq.gz 6.0 GB
Federated EGA
EGAF50000099972 fastq.gz 6.1 GB
Federated EGA
EGAF50000099973 fastq.gz 7.8 GB
Federated EGA
EGAF50000099974 fastq.gz 8.1 GB
Federated EGA
EGAF50000099975 fastq.gz 5.1 GB
Federated EGA
EGAF50000099976 fastq.gz 5.3 GB
Federated EGA
EGAF50000099977 fastq.gz 6.7 GB
Federated EGA
EGAF50000099978 fastq.gz 6.9 GB
Federated EGA
EGAF50000099980 xlsx 13.2 kB
Federated EGA
197 Files (1.4 TB)