About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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ovarian cancer sample RNA-seq

Tissue samples were collected from 18 ovarian cancer patients. After mechanical and enzymatic dissociation, a part of these tissues underwent growth factoromics analysis. For four cases, single-cell sequencing analysis was conducted under conditions with or without estradiol. Additionally, the remains of the tissues were frozen and subsequently subjected to bulk RNA-sequencing on 17 of these samples. Sixteen cases were diagnosed as HGSOC, while two samples were clear cell or mucinous type (Extended Data Table 1). All cases were grade 3, and none had received neoadjuvant chemotherapy. - Group C1, Epithelial Ovarian Cancer(EOC) patients with estrogen responsiveness : 6 samples - Group C2, Epithelial Ovarian Cancer(EOC) patients with estrogen non-responsiveness : 10 samples - non-classified 1-sample

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DUO:0000018
version: 2021-02-23

not for profit, non commercial use only

This data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.

DUO:0000042
version: 2021-02-23

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

ovarian cancer patient NGS policy

Data Access Agreement of NGS data of epithelial ovarian cancer (EOC) experiment

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000422 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000142586 fastq.gz 3.2 GB
EGAF50000142587 fastq.gz 3.3 GB
EGAF50000499977 fastq.gz 4.0 GB
EGAF50000499978 fastq.gz 4.0 GB
EGAF50000499979 fastq.gz 3.5 GB
EGAF50000499980 fastq.gz 3.5 GB
EGAF50000499981 fastq.gz 3.7 GB
EGAF50000499982 fastq.gz 3.6 GB
EGAF50000499983 fastq.gz 4.2 GB
EGAF50000499984 fastq.gz 3.6 GB
EGAF50000499985 fastq.gz 3.7 GB
EGAF50000499986 fastq.gz 4.3 GB
EGAF50000499987 fastq.gz 3.6 GB
EGAF50000499988 fastq.gz 4.0 GB
EGAF50000499989 fastq.gz 3.8 GB
EGAF50000499990 fastq.gz 4.1 GB
EGAF50000499991 fastq.gz 2.8 GB
EGAF50000499992 fastq.gz 2.8 GB
EGAF50000499993 fastq.gz 4.6 GB
EGAF50000499994 fastq.gz 4.0 GB
EGAF50000499995 fastq.gz 4.6 GB
EGAF50000499996 fastq.gz 3.9 GB
EGAF50000499997 fastq.gz 4.1 GB
EGAF50000499998 fastq.gz 4.1 GB
EGAF50000499999 fastq.gz 2.4 GB
EGAF50000500000 fastq.gz 2.4 GB
EGAF50000500001 fastq.gz 3.8 GB
EGAF50000500002 fastq.gz 3.8 GB
EGAF50000500003 fastq.gz 4.6 GB
EGAF50000500004 fastq.gz 4.6 GB
EGAF50000500005 fastq.gz 3.6 GB
EGAF50000500006 fastq.gz 3.6 GB
EGAF50000500019 fastq.gz 3.7 GB
EGAF50000500020 fastq.gz 3.6 GB
34 Files (127.1 GB)