About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Pregnancy-associated melanoma

The aim of this project is to assess differences in intratumoral immune composition in pregnant melanoma patients versus non pregnant melanoma controls. Samples (N=25) were obtained from a local patient database. From archived FFPE we isolated RNA and performed NGS and bio-informatica data-analysis.

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Netherlands Cancer Institute - Antoni van Leeuwenhoek (NKI-AVL) general policy

Data is available under reasonable request. All data requests will be reviewed by the NKI IRB and must be supported by the Principal Investigator of the study. The researcher will need to sign a data access agreement with the NKI after approval.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000492 RNASeq
  • corrected a typo in the title
  • Dataset Released

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000168313 fastq.gz 5.5 GB Report
EGAF50000168314 fastq.gz 5.7 GB Report
EGAF50000168315 fastq.gz 2.6 GB Report
EGAF50000168316 fastq.gz 2.6 GB Report
EGAF50000168317 fastq.gz 1.7 GB Report
EGAF50000168318 fastq.gz 1.8 GB Report
EGAF50000168319 fastq.gz 3.8 GB Report
EGAF50000168320 fastq.gz 3.8 GB Report
EGAF50000168321 fastq.gz 5.0 GB Report
EGAF50000168322 fastq.gz 5.0 GB Report
EGAF50000168323 fastq.gz 6.5 GB Report
EGAF50000168324 fastq.gz 6.7 GB Report
EGAF50000168325 fastq.gz 5.4 GB Report
EGAF50000168326 fastq.gz 5.4 GB Report
EGAF50000168327 fastq.gz 6.7 GB Report
EGAF50000168328 fastq.gz 6.8 GB Report
EGAF50000168329 fastq.gz 5.6 GB Report
EGAF50000168330 fastq.gz 5.6 GB Report
EGAF50000168331 fastq.gz 5.7 GB Report
EGAF50000168332 fastq.gz 5.7 GB Report
EGAF50000168333 fastq.gz 4.4 GB Report
EGAF50000168334 fastq.gz 4.4 GB Report
EGAF50000168335 fastq.gz 6.0 GB Report
EGAF50000168336 fastq.gz 6.0 GB Report
EGAF50000168337 fastq.gz 4.8 GB Report
EGAF50000168338 fastq.gz 4.8 GB Report
EGAF50000168339 fastq.gz 5.7 GB Report
EGAF50000168340 fastq.gz 5.6 GB Report
EGAF50000168341 fastq.gz 6.1 GB Report
EGAF50000168342 fastq.gz 6.0 GB Report
EGAF50000168343 fastq.gz 4.5 GB Report
EGAF50000168344 fastq.gz 4.4 GB Report
EGAF50000168345 fastq.gz 5.0 GB Report
EGAF50000168346 fastq.gz 5.1 GB Report
EGAF50000168347 fastq.gz 4.5 GB Report
EGAF50000168348 fastq.gz 4.6 GB Report
EGAF50000168349 fastq.gz 3.5 GB Report
EGAF50000168350 fastq.gz 3.5 GB Report
EGAF50000168351 fastq.gz 2.7 GB Report
EGAF50000168352 fastq.gz 2.6 GB Report
EGAF50000168353 fastq.gz 5.9 GB Report
EGAF50000168354 fastq.gz 5.9 GB Report
EGAF50000168355 fastq.gz 4.6 GB Report
EGAF50000168356 fastq.gz 4.6 GB Report
EGAF50000168357 fastq.gz 3.4 GB Report
EGAF50000168358 fastq.gz 3.2 GB Report
EGAF50000168359 fastq.gz 3.1 GB Report
EGAF50000168360 fastq.gz 3.0 GB Report
EGAF50000168361 fastq.gz 4.5 GB Report
EGAF50000168362 fastq.gz 4.6 GB Report
50 Files (234.5 GB)