About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Single-cell transcriptomic profiling of hepatoblastoma tumor organoids

10X Genomics single-cell transcriptomic profiling of hepatoblastoma tumor organoids using Chromium Next GEM Single-Cell 3’ Reagent Kits v3.1 or 3’ CellPlex Multiplexing Kit. Single-cell transcriptomics data (bam files) of hepatoblastoma tumor organoids: 3E, 8F1, 10F2, 13F2, 13F2 late, 13E, 17E, 17F1, 22E, 27F1, 28F1, 31E, 96F1, 121E and 135. Single-cell solutions were obtained from fresh organoid samples using enzymatic digestion.

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Data Access Agreement Princess Máxima Center for pediatric oncology

The Princess Maxima Center for pediatric oncology default access policy to enable re-production of research and re-use of data for scientific purposes. Please contact the DAC (EGAC00001001864) for the most up to date policies.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000561 Transcriptome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000187905 bam 4.3 GB Report
EGAF50000187906 bai 3.7 MB
EGAF50000187907 bai 4.5 MB
EGAF50000187908 bam 6.2 GB Report
EGAF50000187923 bam 3.6 GB Report
EGAF50000187924 bai 3.5 MB
EGAF50000187925 bam 2.1 GB Report
EGAF50000187926 bai 3.1 MB
EGAF50000187927 bam 2.0 GB Report
EGAF50000187928 bai 3.2 MB
EGAF50000187937 bam 4.6 GB Report
EGAF50000187938 bai 3.9 MB
EGAF50000187939 bam 490.4 MB Report
EGAF50000187940 bai 2.8 MB
EGAF50000187941 bam 2.0 GB Report
EGAF50000187942 bai 3.2 MB
EGAF50000187943 bam 1.1 GB Report
EGAF50000187944 bai 3.0 MB
EGAF50000187945 bam 1.2 GB Report
EGAF50000187946 bai 3.0 MB
EGAF50000187947 bam 472.0 MB Report
EGAF50000187948 bai 2.7 MB
EGAF50000187949 bam 3.2 GB Report
EGAF50000187950 bai 3.6 MB
EGAF50000187951 bam 2.1 GB Report
EGAF50000187952 bai 3.1 MB
EGAF50000187953 bam 1.6 GB Report
EGAF50000187954 bai 3.0 MB
EGAF50000187955 bam 1.6 GB Report
EGAF50000187956 bai 3.0 MB
30 Files (36.5 GB)