About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Single cell RNA sequencing of PBMC samples from CRC patients

This data contains scRNA-seq on 14 PBMC samples from colorectal cancer patients.

Request Access

Data policy of Data Access Committee of UZ Leuven

The procedure described below always applies to re-use transfer of genomic or genetic data that are in an external database. This external database can be the European Genome-phenome Archive (EGA). When a researcher receives requests for reuse of data, or when the database requires an intervention of a data access committee, the DAC will assess these requests for reuse and transfer of genomic or genetic data by third parties. Patient consent to research participation (ICF) and compatibility with new data processing should be checked. An application should be submitted at dac@uzleuven.be. So applications for re-use of genomic/genomic data go through the DAC. In the first place, DAC performs a front desk function here. An application form should be completed by the applicant. To begin with, the DAC employee then checks the ICF and its compatibility with further use. The DAC employee also ensures that a check is made with the competent services to ensure that there are no legal impediments. If i) there are possible commercial interests (commercial use of the data by the recipient or the requesting party is a commercial party), ii) the researcher does not agree, or iii) there is some ambiguity about potential risks of the data transfer (e.g. violation (GDPR) legislation, identity of recipient party, use of the data), the question is referred to the DAC advisory board.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000590 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000194198 fastq.gz 3.7 GB
EGAF50000194199 fastq.gz 115.4 MB
EGAF50000194200 fastq.gz 307.8 MB
EGAF50000194201 fastq.gz 748.8 MB
EGAF50000194202 fastq.gz 113.3 MB
EGAF50000194203 fastq.gz 301.5 MB
EGAF50000194204 fastq.gz 732.8 MB
EGAF50000194205 fastq.gz 159.9 MB
EGAF50000194206 fastq.gz 411.9 MB
EGAF50000194207 fastq.gz 1.0 GB
EGAF50000194208 fastq.gz 156.7 MB
EGAF50000194209 fastq.gz 403.3 MB
EGAF50000194210 fastq.gz 987.5 MB
EGAF50000194211 fastq.gz 223.1 MB
EGAF50000194212 fastq.gz 624.9 MB
EGAF50000194213 fastq.gz 1.5 GB
EGAF50000194214 fastq.gz 222.4 MB
EGAF50000194215 fastq.gz 622.9 MB
EGAF50000194216 fastq.gz 1.5 GB
EGAF50000194217 fastq.gz 289.1 MB
EGAF50000194218 fastq.gz 794.9 MB
EGAF50000194219 fastq.gz 1.9 GB
EGAF50000194220 fastq.gz 288.1 MB
EGAF50000194221 fastq.gz 792.0 MB
EGAF50000194222 fastq.gz 1.9 GB
EGAF50000194223 fastq.gz 445.7 MB
EGAF50000194224 fastq.gz 1.3 GB
EGAF50000194225 fastq.gz 3.1 GB
EGAF50000194226 fastq.gz 443.3 MB
EGAF50000194227 fastq.gz 1.3 GB
EGAF50000194228 fastq.gz 3.1 GB
EGAF50000194229 fastq.gz 332.7 MB
EGAF50000194230 fastq.gz 996.7 MB
EGAF50000194231 fastq.gz 2.4 GB
EGAF50000194232 fastq.gz 330.8 MB
EGAF50000194233 fastq.gz 992.7 MB
EGAF50000194234 fastq.gz 2.4 GB
EGAF50000194235 fastq.gz 759.1 MB
EGAF50000194236 fastq.gz 2.3 GB
EGAF50000194237 fastq.gz 5.5 GB
EGAF50000194238 fastq.gz 767.4 MB
EGAF50000194239 fastq.gz 2.4 GB
EGAF50000194240 fastq.gz 5.6 GB
EGAF50000194241 fastq.gz 373.9 MB
EGAF50000194242 fastq.gz 1.1 GB
EGAF50000194243 fastq.gz 2.6 GB
EGAF50000194244 fastq.gz 374.8 MB
EGAF50000194245 fastq.gz 1.1 GB
EGAF50000194246 fastq.gz 2.7 GB
EGAF50000194247 fastq.gz 200.9 MB
EGAF50000194248 fastq.gz 598.3 MB
EGAF50000194249 fastq.gz 1.5 GB
EGAF50000194250 fastq.gz 200.2 MB
EGAF50000194251 fastq.gz 598.7 MB
EGAF50000194252 fastq.gz 1.5 GB
EGAF50000194253 fastq.gz 469.0 MB
EGAF50000194254 fastq.gz 1.4 GB
EGAF50000194255 fastq.gz 3.4 GB
EGAF50000194256 fastq.gz 478.9 MB
EGAF50000194257 fastq.gz 1.5 GB
EGAF50000194258 fastq.gz 3.5 GB
EGAF50000194259 fastq.gz 409.8 MB
EGAF50000194260 fastq.gz 1.2 GB
EGAF50000194261 fastq.gz 2.9 GB
EGAF50000194262 fastq.gz 409.9 MB
EGAF50000194263 fastq.gz 1.2 GB
EGAF50000194264 fastq.gz 2.9 GB
EGAF50000194265 fastq.gz 402.9 MB
EGAF50000194266 fastq.gz 1.2 GB
EGAF50000194267 fastq.gz 2.9 GB
EGAF50000194268 fastq.gz 399.8 MB
EGAF50000194269 fastq.gz 1.2 GB
EGAF50000194270 fastq.gz 2.9 GB
EGAF50000194271 fastq.gz 887.7 MB
EGAF50000194272 fastq.gz 2.8 GB
EGAF50000194273 fastq.gz 6.8 GB
EGAF50000194274 fastq.gz 887.6 MB
EGAF50000194275 fastq.gz 2.8 GB
EGAF50000194276 fastq.gz 6.8 GB
EGAF50000194277 fastq.gz 450.5 MB
EGAF50000194278 fastq.gz 1.3 GB
EGAF50000194279 fastq.gz 3.1 GB
EGAF50000194280 fastq.gz 449.9 MB
EGAF50000194281 fastq.gz 1.3 GB
EGAF50000194282 fastq.gz 3.1 GB
EGAF50000194283 fastq.gz 1.7 GB
EGAF50000194284 fastq.gz 5.2 GB
EGAF50000194285 fastq.gz 12.7 GB
EGAF50000194286 fastq.gz 1.7 GB
EGAF50000194287 fastq.gz 5.2 GB
EGAF50000194288 fastq.gz 12.6 GB
EGAF50000194289 fastq.gz 397.0 MB
EGAF50000194290 fastq.gz 1.2 GB
EGAF50000194291 fastq.gz 2.9 GB
EGAF50000194292 fastq.gz 399.0 MB
EGAF50000194293 fastq.gz 1.2 GB
EGAF50000194294 fastq.gz 3.0 GB
EGAF50000194295 fastq.gz 197.4 MB
EGAF50000194296 fastq.gz 608.8 MB
EGAF50000194297 fastq.gz 1.5 GB
EGAF50000194298 fastq.gz 197.2 MB
EGAF50000194299 fastq.gz 610.4 MB
EGAF50000194300 fastq.gz 1.5 GB
EGAF50000194301 fastq.gz 462.6 MB
EGAF50000194302 fastq.gz 1.5 GB
EGAF50000194303 fastq.gz 3.5 GB
EGAF50000194304 fastq.gz 473.8 MB
EGAF50000194305 fastq.gz 1.5 GB
EGAF50000194306 fastq.gz 3.6 GB
EGAF50000194307 fastq.gz 428.8 MB
EGAF50000194308 fastq.gz 1.2 GB
EGAF50000194309 fastq.gz 3.0 GB
EGAF50000194310 fastq.gz 430.0 MB
EGAF50000194311 fastq.gz 1.3 GB
EGAF50000194312 fastq.gz 3.1 GB
EGAF50000194313 fastq.gz 235.7 MB
EGAF50000194314 fastq.gz 699.8 MB
EGAF50000194315 fastq.gz 1.7 GB
EGAF50000194316 fastq.gz 234.6 MB
EGAF50000194317 fastq.gz 699.3 MB
EGAF50000194318 fastq.gz 1.7 GB
EGAF50000194319 fastq.gz 548.0 MB
EGAF50000194320 fastq.gz 1.7 GB
EGAF50000194321 fastq.gz 4.0 GB
EGAF50000194322 fastq.gz 558.5 MB
EGAF50000194323 fastq.gz 1.7 GB
EGAF50000194324 fastq.gz 4.1 GB
EGAF50000194325 fastq.gz 350.9 MB
EGAF50000194326 fastq.gz 1.0 GB
EGAF50000194327 fastq.gz 2.5 GB
EGAF50000194328 fastq.gz 352.8 MB
EGAF50000194329 fastq.gz 1.0 GB
EGAF50000194330 fastq.gz 2.5 GB
EGAF50000194331 fastq.gz 190.2 MB
EGAF50000194332 fastq.gz 553.3 MB
EGAF50000194333 fastq.gz 1.4 GB
EGAF50000194334 fastq.gz 189.1 MB
EGAF50000194335 fastq.gz 552.9 MB
EGAF50000194336 fastq.gz 1.4 GB
EGAF50000194337 fastq.gz 443.0 MB
EGAF50000194338 fastq.gz 1.3 GB
EGAF50000194339 fastq.gz 3.1 GB
EGAF50000194340 fastq.gz 452.5 MB
EGAF50000194341 fastq.gz 1.4 GB
EGAF50000194342 fastq.gz 3.2 GB
EGAF50000194343 fastq.gz 403.0 MB
EGAF50000194344 fastq.gz 1.2 GB
EGAF50000194345 fastq.gz 2.9 GB
EGAF50000194346 fastq.gz 401.5 MB
EGAF50000194347 fastq.gz 1.2 GB
EGAF50000194348 fastq.gz 2.9 GB
EGAF50000194349 fastq.gz 213.2 MB
EGAF50000194350 fastq.gz 648.1 MB
EGAF50000194351 fastq.gz 1.6 GB
EGAF50000194352 fastq.gz 212.0 MB
EGAF50000194353 fastq.gz 646.2 MB
EGAF50000194354 fastq.gz 1.6 GB
EGAF50000194355 fastq.gz 491.7 MB
EGAF50000194356 fastq.gz 1.5 GB
EGAF50000194357 fastq.gz 3.7 GB
EGAF50000194358 fastq.gz 499.0 MB
EGAF50000194359 fastq.gz 1.6 GB
EGAF50000194360 fastq.gz 3.7 GB
EGAF50000194361 fastq.gz 449.3 MB
EGAF50000194362 fastq.gz 1.3 GB
EGAF50000194363 fastq.gz 3.1 GB
EGAF50000194364 fastq.gz 446.5 MB
EGAF50000194365 fastq.gz 1.3 GB
EGAF50000194366 fastq.gz 3.1 GB
EGAF50000194367 fastq.gz 230.3 MB
EGAF50000194368 fastq.gz 674.4 MB
EGAF50000194369 fastq.gz 1.6 GB
EGAF50000194370 fastq.gz 227.9 MB
EGAF50000194371 fastq.gz 669.5 MB
EGAF50000194372 fastq.gz 1.6 GB
EGAF50000194373 fastq.gz 529.6 MB
EGAF50000194374 fastq.gz 1.6 GB
EGAF50000194375 fastq.gz 3.8 GB
EGAF50000194376 fastq.gz 533.8 MB
EGAF50000194377 fastq.gz 1.6 GB
EGAF50000194378 fastq.gz 3.8 GB
EGAF50000194379 fastq.gz 271.9 MB
EGAF50000194380 fastq.gz 760.3 MB
EGAF50000194381 fastq.gz 1.9 GB
EGAF50000194382 fastq.gz 273.5 MB
EGAF50000194383 fastq.gz 771.6 MB
EGAF50000194384 fastq.gz 1.9 GB
EGAF50000194385 fastq.gz 173.4 MB
EGAF50000194386 fastq.gz 501.8 MB
EGAF50000194387 fastq.gz 1.2 GB
EGAF50000194388 fastq.gz 172.7 MB
EGAF50000194389 fastq.gz 502.2 MB
EGAF50000194390 fastq.gz 1.2 GB
EGAF50000194391 fastq.gz 403.6 MB
EGAF50000194392 fastq.gz 1.2 GB
EGAF50000194393 fastq.gz 2.9 GB
EGAF50000194394 fastq.gz 413.5 MB
EGAF50000194395 fastq.gz 1.2 GB
EGAF50000194396 fastq.gz 3.0 GB
EGAF50000194397 fastq.gz 519.0 MB
EGAF50000194398 fastq.gz 1.5 GB
EGAF50000194399 fastq.gz 3.7 GB
EGAF50000194400 fastq.gz 528.2 MB
EGAF50000194401 fastq.gz 1.5 GB
EGAF50000194402 fastq.gz 3.8 GB
EGAF50000194403 fastq.gz 217.6 MB
EGAF50000194404 fastq.gz 635.3 MB
EGAF50000194405 fastq.gz 1.6 GB
EGAF50000194406 fastq.gz 216.6 MB
EGAF50000194407 fastq.gz 635.0 MB
EGAF50000194408 fastq.gz 1.6 GB
EGAF50000194409 fastq.gz 511.6 MB
EGAF50000194410 fastq.gz 1.5 GB
EGAF50000194411 fastq.gz 528.2 MB
EGAF50000194412 fastq.gz 1.6 GB
EGAF50000194413 fastq.gz 3.8 GB
216 Files (334.5 GB)