About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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NSCLC ctDNA multigenic panel

We analyzed cfDNA plasma samples of subjects with non-small cell lung cancer: treatment naïve (n=24) and prior-treated (n=8). Driver variants for 11 genes was available with Oncomine Lung cfDNA Assay, were assessed by Next-Generation Sequecing. Sequencing data were pre-processed in Ion S5 Torrent Server and aligned to the hg19 human reference genome. Variant calls were performed by IonReporter 5.10 software.

Request Access

DUO:0000018
version: 2021-02-23

not for profit, non commercial use only

This data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.

DUO:0000020
version: 2021-02-23

collaboration required

This data use modifier indicates that the requestor must agree to collaboration with the primary study investigator(s).

Barretos Cancer Hospital Policy

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000643 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000216469 fastq.gz 669.9 MB
EGAF50000216470 fastq.gz 415.9 MB
EGAF50000216471 fastq.gz 703.1 MB
EGAF50000216472 fastq.gz 1.3 GB
EGAF50000216473 fastq.gz 601.4 MB
EGAF50000216474 fastq.gz 665.1 MB
EGAF50000216475 fastq.gz 1.2 GB
EGAF50000216476 fastq.gz 994.7 MB
EGAF50000216477 fastq.gz 1.2 GB
EGAF50000216478 fastq.gz 1.2 GB
EGAF50000216479 fastq.gz 1.1 GB
EGAF50000216480 fastq.gz 1.6 GB
EGAF50000216481 fastq.gz 861.2 MB
EGAF50000216482 fastq.gz 731.8 MB
EGAF50000216483 fastq.gz 1.0 GB
EGAF50000216484 fastq.gz 1.2 GB
EGAF50000216485 fastq.gz 1.2 GB
EGAF50000216486 fastq.gz 1.3 GB
EGAF50000216487 fastq.gz 363.4 MB
EGAF50000216488 fastq.gz 991.0 MB
EGAF50000216489 fastq.gz 657.7 MB
EGAF50000216490 fastq.gz 566.7 MB
EGAF50000216491 fastq.gz 406.3 MB
EGAF50000216492 fastq.gz 801.2 MB
EGAF50000216493 fastq.gz 687.4 MB
EGAF50000216494 fastq.gz 604.3 MB
EGAF50000216495 fastq.gz 520.7 MB
EGAF50000216496 fastq.gz 520.2 MB
EGAF50000216497 fastq.gz 600.0 MB
EGAF50000216498 fastq.gz 440.0 MB
EGAF50000216499 fastq.gz 912.8 MB
EGAF50000216500 fastq.gz 1.1 GB
32 Files (27.1 GB)