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PEVOsq WES data

Raw paired FASTQ data of patients at baseline from the PEVOsq cohort

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Institut Curie Data Access Agreement - These terms and conditions govern access to the managed access datasets to which the User Institution has requested access. The User Institution agrees to be bound by these terms and conditions.

Definitions : - Authorised Personnel: The individuals at the User Institution to whom Institut Curie grants access to the Data. This includes the User, the individuals listed in Appendix II and any other individuals for whom the User Institution subsequently requests access to the Data. Details of the initial Authorised Personnel are set out in Appendix II. - Data: The managed access datasets to which the User Institution has requested access. - Data Producers: Institut Curie and the collaborators listed in Appendix I responsible for the development, organisation, and oversight of these Data. - External Collaborator: A collaborator of the User, working for an institution other than the User Institution. - Project: The project for which the User Institution has requested access to these Data. A description of the Project is set out in Appendix II. - Publications: Includes, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. - Research Participant: An individual whose data form part of these Data. - Research Purposes: Shall mean research that is seeking to advance the understanding of genetics and genomics, including the treatment of disorders, and work on statistical methods that may be applied to such research. - User: The principal investigator for the Project. - User Institution(s): The Institution that has requested access to the Data. 1. The User Institution agrees to only use these Data for the purpose of the Project (described in Appendix II) and only for Research Purposes. The User Institution further agrees that it will only use these Data for Research Purposes which are within the limitations (if any) set out in Appendix I. 2. The User Institution agrees to preserve, at all times, the confidentiality of these Data. In particular, it undertakes not to use, or attempt to use these Data to compromise or otherwise infringe the confidentiality of information on Research Participants. Without prejudice to the generality of the foregoing, the User Institution agrees to use at least the measures set out in Appendix I to protect these Data. 3. The User Institution agrees to protect the confidentiality of Research Participants in any research papers or publications that they prepare by taking all reasonable care to limit the possibility of identification. 4. The User Institution agrees not to link or combine these Data to other information or archived data available in a way that could re-identify the Research Participants, even if access to that data has been formally granted to the User Institution or is freely available without restriction. 5. The User Institution agrees only to transfer or disclose these Data, in whole or part, or any material derived from these Data, to the Authorised Personnel. Should the User Institution wish to share these Data with an External Collaborator, the External Collaborator must complete a separate application for access to these Data. 6. The User Institution agrees that the Data Producers, and all other parties involved in the creation, funding or protection of these Data: a) make no warranty or representation, express or implied as to the accuracy, quality or comprehensiveness of these Data; b) exclude to the fullest extent permitted by law all liability for actions, claims, proceedings, demands, losses (including but not limited to loss of profit), costs, awards damages and payments made by the Recipient that may arise (whether directly or indirectly) in any way whatsoever from the Recipient’s use of these Data or from the unavailability of, or break in access to, these Data for whatever reason and; c) bear no responsibility for the further analysis or interpretation of these Data. 7. The User Institution agrees to follow the Fort Lauderdale Guidelines (http://www.wellcome.ac.uk/stellent/groups/corporatesite/@policy_communications/documents/web_document/wtd003207.pdf ) and the Toronto Statement (http://www.nature.com/nature/journal/v461/n7261/full/461168a.html). This includes but is not limited to recognising the contribution of the Data Producers and including a proper acknowledgement in all reports or publications resulting from the use of these Data. 8. The User Institution agrees to follow the Publication Policy in Appendix III. This includes respecting the moratorium period for the Data Producers to publish the first peer-reviewed report describing and analysing these Data. 9. The User Institution agrees not to make intellectual property claims on these Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of these Data, or conclusion drawn directly from these Data. 10. The User Institution can elect to perform further research that would add intellectual and resource capital to these data and decide to obtain intellectual property rights on these downstream discoveries. In this case, the User Institution agrees to implement licensing policies that will not obstruct further research and to follow the U.S. National Institutes of Health Best Practices for the Licensing of Genomic Inventions (2005) (https://www.icgc.org/files/daco/NIH_BestPracticesLicensingGenomicInventions_2005_en.pdf ) in conformity with the Organisation for Economic Co-operation and Development Guidelines for the Licensing of the Genetic Inventions (2006) (http://www.oecd.org/science/biotech/36198812.pdf ). 11. The User Institution agrees to destroy/discard the Data held, once it is no longer used for the Project, unless obliged to retain the data for archival purposes in conformity with audit or legal requirements. 12. The User Institution will notify Institut Curie within 30 days of any changes or departures of Authorised Personnel. 13. The User Institution will notify Institut Curie prior to any significant changes to the protocol for the Project. 14. The User Institution will notify Institut Curie as soon as it becomes aware of a breach of the terms or conditions of this agreement. 15. Institut Curie may terminate this agreement by written notice to the User Institution. If this agreement terminates for any reason, the User Institution will be required to destroy any Data held, including copies and backup copies. This clause does not prevent the User Institution from retaining these data for archival purpose in conformity with audit or legal requirements. 16. The User Institution accepts that it may be necessary for the Data Producers to alter the terms of this agreement from time to time. As an example, this may include specific provisions relating to the Data required by Data Producers other than Institut Curie. In the event that changes are required, the Data Producers or their appointed agent will contact the User Institution to inform it of the changes and the User Institution may elect to accept the changes or terminate the agreement. 17. If requested, the User Institution will allow data security and management documentation to be inspected to verify that it is complying with the terms of this agreement. 18. The User Institution agrees to distribute a copy of these terms to the Authorised Personnel. The User Institution will procure that the Authorised Personnel comply with the terms of this agreement. 19. This agreement (and any dispute, controversy, proceedings or claim of whatever nature arising out of this agreement or its formation) shall be construed, interpreted and governed by the laws of France and shall be subject to the exclusive jurisdiction of the French courts. APPENDIX I – DATASET DETAILS APPENDIX II ––PROJECT DETAILS APPENDIX III –– PUBLICATION POLICY

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000731 Exome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF50000256122 fastq.gz 4.2 GB
EGAF50000256123 fastq.gz 17.4 GB
EGAF50000256124 fastq.gz 17.3 GB
EGAF50000256125 fastq.gz 12.6 GB
EGAF50000256126 fastq.gz 7.0 GB
EGAF50000256127 fastq.gz 5.3 GB
EGAF50000256128 fastq.gz 11.6 GB
EGAF50000256129 fastq.gz 12.7 GB
EGAF50000256130 fastq.gz 6.9 GB
EGAF50000256131 fastq.gz 14.4 GB
EGAF50000256132 fastq.gz 12.4 GB
EGAF50000256133 fastq.gz 12.9 GB
EGAF50000256134 fastq.gz 5.1 GB
EGAF50000256135 fastq.gz 18.5 GB
EGAF50000256136 fastq.gz 14.4 GB
EGAF50000256137 fastq.gz 8.7 GB
EGAF50000256138 fastq.gz 15.7 GB
EGAF50000256139 fastq.gz 15.9 GB
EGAF50000256140 fastq.gz 14.1 GB
EGAF50000256141 fastq.gz 14.5 GB
EGAF50000256142 fastq.gz 7.8 GB
EGAF50000256143 fastq.gz 8.1 GB
EGAF50000256144 fastq.gz 9.3 GB
EGAF50000256145 fastq.gz 9.6 GB
EGAF50000256146 fastq.gz 7.4 GB
EGAF50000256147 fastq.gz 5.5 GB
EGAF50000256148 fastq.gz 9.2 GB
EGAF50000256149 fastq.gz 9.3 GB
EGAF50000256150 fastq.gz 7.8 GB
EGAF50000256151 fastq.gz 8.1 GB
EGAF50000256152 fastq.gz 6.5 GB
EGAF50000256153 fastq.gz 13.4 GB
EGAF50000256154 fastq.gz 13.8 GB
EGAF50000256155 fastq.gz 13.9 GB
EGAF50000256156 fastq.gz 14.4 GB
EGAF50000256157 fastq.gz 12.5 GB
EGAF50000256158 fastq.gz 13.0 GB
EGAF50000256159 fastq.gz 14.6 GB
EGAF50000256160 fastq.gz 14.9 GB
EGAF50000256161 fastq.gz 9.6 GB
EGAF50000256162 fastq.gz 8.0 GB
EGAF50000256163 fastq.gz 8.1 GB
EGAF50000256164 fastq.gz 8.7 GB
EGAF50000256165 fastq.gz 8.9 GB
EGAF50000256166 fastq.gz 7.5 GB
EGAF50000256167 fastq.gz 7.5 GB
EGAF50000256168 fastq.gz 5.9 GB
EGAF50000256169 fastq.gz 6.0 GB
EGAF50000256170 fastq.gz 8.3 GB
EGAF50000256171 fastq.gz 8.5 GB
EGAF50000256172 fastq.gz 15.3 GB
EGAF50000256173 fastq.gz 15.6 GB
EGAF50000256174 fastq.gz 12.0 GB
EGAF50000256175 fastq.gz 12.3 GB
EGAF50000256176 fastq.gz 14.9 GB
EGAF50000256177 fastq.gz 12.2 GB
EGAF50000256178 fastq.gz 12.6 GB
EGAF50000256179 fastq.gz 9.3 GB
EGAF50000256180 fastq.gz 7.5 GB
EGAF50000256181 fastq.gz 7.6 GB
EGAF50000256182 fastq.gz 5.7 GB
EGAF50000256183 fastq.gz 5.8 GB
EGAF50000256184 fastq.gz 5.7 GB
EGAF50000256185 fastq.gz 7.8 GB
EGAF50000256186 fastq.gz 8.1 GB
EGAF50000256187 fastq.gz 7.8 GB
EGAF50000256188 fastq.gz 8.0 GB
EGAF50000256189 fastq.gz 8.2 GB
EGAF50000256190 fastq.gz 8.4 GB
EGAF50000256191 fastq.gz 4.3 GB
EGAF50000256192 fastq.gz 4.3 GB
EGAF50000256193 fastq.gz 8.2 GB
EGAF50000256194 fastq.gz 10.4 GB
EGAF50000256195 fastq.gz 5.6 GB
EGAF50000256196 fastq.gz 11.7 GB
EGAF50000256197 fastq.gz 11.9 GB
EGAF50000256198 fastq.gz 7.1 GB
EGAF50000256199 fastq.gz 7.2 GB
EGAF50000256200 fastq.gz 3.7 GB
EGAF50000256201 fastq.gz 5.0 GB
EGAF50000256202 fastq.gz 8.2 GB
EGAF50000256203 fastq.gz 8.4 GB
EGAF50000256204 fastq.gz 7.4 GB
EGAF50000256205 fastq.gz 9.8 GB
EGAF50000256206 fastq.gz 9.9 GB
EGAF50000256207 fastq.gz 10.9 GB
EGAF50000256208 fastq.gz 8.6 GB
EGAF50000256209 fastq.gz 9.5 GB
EGAF50000256210 fastq.gz 6.2 GB
EGAF50000256211 fastq.gz 6.3 GB
EGAF50000256212 fastq.gz 7.5 GB
EGAF50000256213 fastq.gz 7.6 GB
EGAF50000256214 fastq.gz 7.9 GB
EGAF50000256215 fastq.gz 8.4 GB
EGAF50000256216 fastq.gz 11.5 GB
EGAF50000256217 fastq.gz 8.9 GB
EGAF50000256218 fastq.gz 6.7 GB
EGAF50000256219 fastq.gz 6.8 GB
EGAF50000256220 fastq.gz 5.0 GB
EGAF50000256221 fastq.gz 9.5 GB
EGAF50000256222 fastq.gz 9.0 GB
EGAF50000256223 fastq.gz 11.5 GB
EGAF50000256224 fastq.gz 5.1 GB
EGAF50000256225 fastq.gz 9.0 GB
EGAF50000256226 fastq.gz 12.0 GB
EGAF50000256227 fastq.gz 5.5 GB
EGAF50000256228 fastq.gz 6.6 GB
EGAF50000256229 fastq.gz 14.0 GB
EGAF50000256230 fastq.gz 18.1 GB
EGAF50000256231 fastq.gz 19.0 GB
EGAF50000256232 fastq.gz 3.1 GB
EGAF50000256233 fastq.gz 18.0 GB
EGAF50000256234 fastq.gz 18.3 GB
EGAF50000256235 fastq.gz 16.5 GB
EGAF50000256236 fastq.gz 16.9 GB
EGAF50000256237 fastq.gz 12.3 GB
EGAF50000256238 fastq.gz 15.4 GB
EGAF50000256239 fastq.gz 6.0 GB
EGAF50000256240 fastq.gz 6.3 GB
EGAF50000256241 fastq.gz 6.4 GB
EGAF50000256242 fastq.gz 6.4 GB
EGAF50000256243 fastq.gz 10.0 GB
EGAF50000256244 fastq.gz 6.9 GB
EGAF50000256245 fastq.gz 7.2 GB
EGAF50000256246 fastq.gz 7.4 GB
EGAF50000256247 fastq.gz 7.6 GB
EGAF50000256248 fastq.gz 13.7 GB
EGAF50000256249 fastq.gz 14.2 GB
EGAF50000256250 fastq.gz 13.1 GB
EGAF50000256251 fastq.gz 13.6 GB
EGAF50000256252 fastq.gz 14.9 GB
EGAF50000256253 fastq.gz 15.3 GB
EGAF50000256254 fastq.gz 15.3 GB
EGAF50000256255 fastq.gz 12.1 GB
EGAF50000256256 fastq.gz 12.9 GB
EGAF50000256257 fastq.gz 13.3 GB
EGAF50000256258 fastq.gz 13.2 GB
EGAF50000256259 fastq.gz 13.6 GB
EGAF50000256260 fastq.gz 5.9 GB
EGAF50000256261 fastq.gz 5.9 GB
EGAF50000256262 fastq.gz 8.6 GB
EGAF50000256263 fastq.gz 8.8 GB
EGAF50000256264 fastq.gz 4.7 GB
EGAF50000256265 fastq.gz 9.4 GB
EGAF50000256266 fastq.gz 9.6 GB
EGAF50000256267 fastq.gz 9.2 GB
EGAF50000256268 fastq.gz 9.5 GB
EGAF50000256269 fastq.gz 5.6 GB
EGAF50000256270 fastq.gz 5.8 GB
EGAF50000256271 fastq.gz 12.7 GB
EGAF50000256272 fastq.gz 12.9 GB
EGAF50000256273 fastq.gz 6.3 GB
EGAF50000256274 fastq.gz 6.3 GB
EGAF50000256275 fastq.gz 5.9 GB
EGAF50000256276 fastq.gz 5.9 GB
EGAF50000256277 fastq.gz 5.0 GB
EGAF50000256278 fastq.gz 5.1 GB
EGAF50000256279 fastq.gz 6.2 GB
EGAF50000256280 fastq.gz 9.3 GB
EGAF50000256281 fastq.gz 9.4 GB
EGAF50000256282 fastq.gz 6.3 GB
EGAF50000256283 fastq.gz 6.4 GB
EGAF50000256284 fastq.gz 6.0 GB
EGAF50000256285 fastq.gz 6.2 GB
EGAF50000256286 fastq.gz 5.8 GB
EGAF50000256287 fastq.gz 5.9 GB
EGAF50000256288 fastq.gz 7.8 GB
EGAF50000256289 fastq.gz 8.1 GB
EGAF50000256290 fastq.gz 7.1 GB
EGAF50000256291 fastq.gz 7.3 GB
EGAF50000256292 fastq.gz 5.9 GB
EGAF50000256293 fastq.gz 5.9 GB
EGAF50000256294 fastq.gz 4.7 GB
EGAF50000256295 fastq.gz 4.8 GB
EGAF50000256296 fastq.gz 4.5 GB
EGAF50000256297 fastq.gz 9.1 GB
EGAF50000256298 fastq.gz 3.8 GB
EGAF50000256299 fastq.gz 3.8 GB
EGAF50000256300 fastq.gz 6.1 GB
EGAF50000256301 fastq.gz 6.1 GB
EGAF50000256302 fastq.gz 6.1 GB
EGAF50000256303 fastq.gz 6.3 GB
EGAF50000256304 fastq.gz 6.1 GB
EGAF50000256305 fastq.gz 6.3 GB
EGAF50000256306 fastq.gz 5.9 GB
EGAF50000256307 fastq.gz 6.1 GB
EGAF50000256308 fastq.gz 5.6 GB
EGAF50000256309 fastq.gz 4.7 GB
EGAF50000256310 fastq.gz 6.9 GB
EGAF50000256311 fastq.gz 6.9 GB
EGAF50000256312 fastq.gz 4.3 GB
EGAF50000256313 fastq.gz 4.4 GB
EGAF50000256314 fastq.gz 8.3 GB
EGAF50000256315 fastq.gz 6.2 GB
EGAF50000256316 fastq.gz 7.2 GB
EGAF50000256317 fastq.gz 9.2 GB
EGAF50000256318 fastq.gz 9.4 GB
EGAF50000256319 fastq.gz 18.5 GB
EGAF50000256320 fastq.gz 19.1 GB
EGAF50000256321 fastq.gz 5.4 GB
EGAF50000256322 fastq.gz 5.7 GB
EGAF50000256323 fastq.gz 4.4 GB
EGAF50000256324 fastq.gz 4.5 GB
EGAF50000256325 fastq.gz 4.3 GB
EGAF50000256326 fastq.gz 5.0 GB
EGAF50000256327 fastq.gz 5.1 GB
EGAF50000256328 fastq.gz 5.5 GB
EGAF50000256329 fastq.gz 5.7 GB
EGAF50000256330 fastq.gz 6.0 GB
EGAF50000256331 fastq.gz 6.1 GB
EGAF50000256332 fastq.gz 12.7 GB
EGAF50000256333 fastq.gz 13.2 GB
EGAF50000256334 fastq.gz 6.2 GB
EGAF50000256335 fastq.gz 6.5 GB
EGAF50000256336 fastq.gz 7.4 GB
EGAF50000256337 fastq.gz 7.6 GB
EGAF50000256338 fastq.gz 12.0 GB
EGAF50000256339 fastq.gz 12.3 GB
EGAF50000256340 fastq.gz 9.1 GB
EGAF50000256341 fastq.gz 16.8 GB
EGAF50000256342 fastq.gz 17.2 GB
EGAF50000256343 fastq.gz 15.1 GB
EGAF50000256344 fastq.gz 5.9 GB
EGAF50000256345 fastq.gz 4.7 GB
EGAF50000256346 fastq.gz 10.4 GB
EGAF50000256347 fastq.gz 11.5 GB
EGAF50000256348 fastq.gz 12.0 GB
EGAF50000256349 fastq.gz 17.3 GB
EGAF50000256350 fastq.gz 17.7 GB
EGAF50000256351 fastq.gz 8.0 GB
EGAF50000256352 fastq.gz 14.0 GB
EGAF50000256353 fastq.gz 8.6 GB
EGAF50000256354 fastq.gz 17.0 GB
EGAF50000256355 fastq.gz 17.7 GB
EGAF50000256356 fastq.gz 18.4 GB
EGAF50000256357 fastq.gz 14.8 GB
EGAF50000256358 fastq.gz 7.9 GB
EGAF50000256359 fastq.gz 8.0 GB
EGAF50000256360 fastq.gz 6.6 GB
EGAF50000256361 fastq.gz 10.1 GB
EGAF50000256362 fastq.gz 13.7 GB
EGAF50000256363 fastq.gz 14.1 GB
EGAF50000256364 fastq.gz 9.4 GB
EGAF50000256365 fastq.gz 8.2 GB
EGAF50000256366 fastq.gz 5.5 GB
EGAF50000256367 fastq.gz 11.5 GB
EGAF50000256368 fastq.gz 14.4 GB
EGAF50000256369 fastq.gz 6.3 GB
EGAF50000256370 fastq.gz 4.8 GB
EGAF50000256371 fastq.gz 4.3 GB
EGAF50000256372 fastq.gz 6.0 GB
EGAF50000256373 fastq.gz 7.3 GB
EGAF50000256374 fastq.gz 5.5 GB
EGAF50000256375 fastq.gz 10.8 GB
EGAF50000256376 fastq.gz 8.0 GB
EGAF50000256377 fastq.gz 5.6 GB
EGAF50000256378 fastq.gz 9.6 GB
EGAF50000256379 fastq.gz 9.2 GB
EGAF50000256380 fastq.gz 10.7 GB
EGAF50000256381 fastq.gz 15.6 GB
EGAF50000256382 fastq.gz 8.6 GB
EGAF50000256383 fastq.gz 3.7 GB
EGAF50000256384 fastq.gz 7.6 GB
EGAF50000256385 fastq.gz 11.7 GB
EGAF50000256386 fastq.gz 14.8 GB
EGAF50000256387 fastq.gz 6.9 GB
EGAF50000256388 fastq.gz 7.0 GB
EGAF50000256389 fastq.gz 9.7 GB
EGAF50000256390 fastq.gz 5.3 GB
EGAF50000256391 fastq.gz 12.0 GB
EGAF50000256392 fastq.gz 9.4 GB
EGAF50000256393 fastq.gz 5.6 GB
EGAF50000256394 fastq.gz 12.4 GB
EGAF50000256395 fastq.gz 17.0 GB
EGAF50000256396 fastq.gz 5.3 GB
EGAF50000256397 fastq.gz 15.3 GB
EGAF50000256398 fastq.gz 8.6 GB
EGAF50000256399 fastq.gz 10.7 GB
EGAF50000256400 fastq.gz 5.2 GB
EGAF50000256401 fastq.gz 9.6 GB
EGAF50000256402 fastq.gz 7.7 GB
EGAF50000256403 fastq.gz 8.6 GB
EGAF50000256404 fastq.gz 12.0 GB
EGAF50000256405 fastq.gz 9.1 GB
EGAF50000256406 fastq.gz 5.2 GB
EGAF50000256407 fastq.gz 9.2 GB
EGAF50000256408 fastq.gz 12.0 GB
EGAF50000256409 fastq.gz 12.0 GB
EGAF50000256410 fastq.gz 15.2 GB
EGAF50000256411 fastq.gz 11.3 GB
EGAF50000256412 fastq.gz 6.8 GB
EGAF50000256413 fastq.gz 5.2 GB
EGAF50000256414 fastq.gz 6.2 GB
EGAF50000256415 fastq.gz 9.7 GB
EGAF50000256416 fastq.gz 5.3 GB
EGAF50000256417 fastq.gz 18.3 GB
EGAF50000256418 fastq.gz 8.9 GB
EGAF50000256419 fastq.gz 8.1 GB
EGAF50000256420 fastq.gz 6.1 GB
EGAF50000256421 fastq.gz 5.8 GB
EGAF50000256422 fastq.gz 5.5 GB
EGAF50000256423 fastq.gz 3.1 GB
EGAF50000256424 fastq.gz 15.0 GB
EGAF50000256425 fastq.gz 11.8 GB
EGAF50000256426 fastq.gz 12.7 GB
EGAF50000256427 fastq.gz 4.9 GB
EGAF50000256428 fastq.gz 5.8 GB
EGAF50000256429 fastq.gz 6.1 GB
308 Files (2.9 TB)