RNASeq from PC12 cell lines (derived from PPGL) cultivated under 21% (normoxia) and 1% (hypoxia) oxygen conditions.
RNASeq fastq files from PC12 cells (derived from rat PPGL) were cultivated in normoxia conditions (37˚C, 5% CO2 and 21% O2 balanced with N2) or in hypoxia conditions in a hypoxic incubator (37˚C, 5% CO2 and 1% O2 balanced with N2), for short time (12h, 24h, and 48h) or prolonged time (36 days). Samples at each timepoint were cultured in triplicate (total 24 paired end fastq files). Sequencing was performed with the Illumina NovaSeq6000.
- 07/03/2025
- 24 samples
- DAC: EGAC50000000484
- Technology: Illumina NovaSeq 6000
DUO:0000006 version: 2021-02-23
health or medical or biomedical research
This data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.
DUO:0000020 version: 2021-02-23
collaboration required
This data use modifier indicates that the requestor must agree to collaboration with the primary study investigator(s).
DUO:0000021 version: 2021-02-23
ethics approval required
This data use modifier indicates that the requestor must provide documentation of local IRB/ERB approval.
DUO:0000025 version: 2021-02-23
time limit on use
This data use modifier indicates that use is approved for a specific number of months.
Convergent genetic adaptation in human tumors developed under systemic hypoxia and in populations living at high altitudes
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000000814 | RNASeq |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
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| EGAF50000305745 | fq.gz | 6.1 GB |
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| EGAF50000305746 | fq.gz | 6.6 GB |
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| EGAF50000305748 | fq.gz | 6.5 GB |
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| EGAF50000305749 | fq.gz | 6.5 GB |
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| EGAF50000305750 | fq.gz | 6.5 GB |
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| EGAF50000305755 | fq.gz | 6.6 GB |
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| EGAF50000305757 | fq.gz | 6.7 GB |
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| EGAF50000305758 | fq.gz | 6.9 GB |
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| EGAF50000305759 | fq.gz | 6.5 GB |
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| EGAF50000305760 | fq.gz | 6.8 GB |
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| EGAF50000305761 | fq.gz | 6.9 GB |
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| EGAF50000305762 | fq.gz | 7.2 GB |
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| EGAF50000305763 | fq.gz | 6.2 GB |
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| EGAF50000305777 | fq.gz | 6.3 GB |
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| EGAF50000305778 | fq.gz | 6.8 GB |
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| EGAF50000305786 | fq.gz | 6.4 GB |
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| EGAF50000305794 | fq.gz | 6.6 GB |
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| EGAF50000305802 | fq.gz | 6.5 GB |
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| EGAF50000305803 | fq.gz | 6.7 GB |
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| EGAF50000305804 | fq.gz | 6.8 GB |
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| EGAF50000305805 | fq.gz | 6.6 GB |
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| EGAF50000305806 | fq.gz | 6.8 GB |
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| EGAF50000305807 | fq.gz | 6.3 GB |
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| EGAF50000305808 | fq.gz | 6.9 GB |
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| EGAF50000305809 | fq.gz | 6.6 GB |
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| EGAF50000305810 | fq.gz | 6.3 GB |
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| EGAF50000305811 | fq.gz | 6.4 GB |
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| EGAF50000305812 | fq.gz | 6.7 GB |
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| EGAF50000305813 | fq.gz | 7.0 GB |
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| EGAF50000305814 | fq.gz | 7.1 GB |
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| EGAF50000305815 | fq.gz | 6.4 GB |
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| EGAF50000305816 | fq.gz | 6.3 GB |
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| EGAF50000305817 | fq.gz | 6.5 GB |
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| EGAF50000305818 | fq.gz | 7.5 GB |
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| EGAF50000305819 | fq.gz | 7.9 GB |
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| EGAF50000305820 | fq.gz | 6.7 GB |
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| EGAF50000305821 | fq.gz | 6.4 GB |
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| EGAF50000305822 | fq.gz | 6.7 GB |
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| EGAF50000305823 | fq.gz | 6.5 GB |
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| EGAF50000305824 | fq.gz | 6.5 GB |
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| EGAF50000305825 | fq.gz | 6.8 GB |
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| EGAF50000305826 | fq.gz | 6.5 GB |
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| EGAF50000305827 | fq.gz | 6.7 GB |
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| EGAF50000305828 | fq.gz | 6.5 GB |
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| EGAF50000305830 | fq.gz | 6.3 GB |
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| EGAF50000305831 | fq.gz | 7.5 GB |
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| EGAF50000305832 | fq.gz | 7.7 GB |
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| EGAF50000305833 | fq.gz | 6.7 GB |
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| 48 Files (320.6 GB) | ||||