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WES PTCL Data

Whole Exome Sequencing (WES) of 153 FFPE DNA samples of Peripheral T-Cell Lymphoma. Associated with "Molecular biomarkers for stratification periheral T cell lymphoma" study.

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Data originating from patient samples

The Amsterdam UMC, tumor genome analysis core, allows access to published datasets upon written application and signature of a Data Access Agreement (DAA). In addition, applications to clinical datasets require approval by a Data Access Committee (DAC), who assess whether the proposed work is allowed given patient consent, as well as the scientific purpose. To aid this process we ask you to provide the information below. Requests will be prioritised according to novelty of the research question. Applications with insufficient detail on objectives, justification, and methods/planned analyses are unlikely to be accepted. 1.Reference number for the dataset 2.Full legal name and address of university/institution 3.Name(s) of the Principle Investigator who will use the data: 4.Name(s) and job title(s) of any other investigators who will use the data: 5.Please provide a minimum of one reference to a publication that can be found on PubMed and where the Principle Investigator is an author: 6.How will the data be stored and where will it be stored? 7.What is the proposed study title and what are the objectives and outcomes of the study in which the data will be used 8.Please provide a brief justification or rationale for the proposed study (max 250 words) 9.Please provide a brief description of planned data analyses (max 250 words): 10.Will the results arising from use of the data be used for the creation of products for sale or for any commercial purpose?

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006691 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF50000312200 bam 21.1 GB
EGAF50000312201 bam 15.4 GB
EGAF50000312202 bam 25.6 GB
EGAF50000312203 bam 21.7 GB
EGAF50000312204 bam 25.4 GB
EGAF50000312205 bam 13.7 GB
EGAF50000312206 bam 20.5 GB
EGAF50000312207 bam 19.2 GB
EGAF50000312208 bam 21.4 GB
EGAF50000312209 bam 11.9 GB
EGAF50000312210 bam 23.0 GB
EGAF50000312211 bam 14.0 GB
EGAF50000312212 bam 18.7 GB
EGAF50000312213 bam 17.0 GB
EGAF50000312214 bam 19.2 GB
EGAF50000312215 bam 12.1 GB
EGAF50000312216 bam 29.5 GB
EGAF50000312217 bam 15.7 GB
EGAF50000312218 bam 13.7 GB
EGAF50000312219 bam 10.8 GB
EGAF50000312220 bam 12.8 GB
EGAF50000312221 bam 18.9 GB
EGAF50000312222 bam 11.0 GB
EGAF50000312223 bam 11.4 GB
EGAF50000312224 bam 11.6 GB
EGAF50000312225 bam 10.8 GB
EGAF50000312226 bam 18.0 GB
EGAF50000312227 bam 19.5 GB
EGAF50000312228 bam 13.4 GB
EGAF50000312229 bam 13.3 GB
EGAF50000312230 bam 13.7 GB
EGAF50000312231 bam 11.6 GB
EGAF50000312232 bam 15.3 GB
EGAF50000312233 bam 19.7 GB
EGAF50000312234 bam 12.9 GB
EGAF50000312235 bam 30.5 GB
EGAF50000312236 bam 20.5 GB
EGAF50000312237 bam 13.7 GB
EGAF50000312238 bam 15.2 GB
EGAF50000312239 bam 6.1 GB
EGAF50000312240 bam 21.9 GB
EGAF50000312241 bam 20.3 GB
EGAF50000312242 bam 19.6 GB
EGAF50000312243 bam 14.3 GB
EGAF50000312244 bam 18.8 GB
EGAF50000312245 bam 12.3 GB
EGAF50000312246 bam 11.5 GB
EGAF50000312247 bam 14.6 GB
EGAF50000312248 bam 13.2 GB
EGAF50000312249 bam 20.4 GB
EGAF50000312250 bam 13.3 GB
EGAF50000312251 bam 17.0 GB
EGAF50000312252 bam 16.6 GB
EGAF50000312253 bam 15.7 GB
EGAF50000312254 bam 15.0 GB
EGAF50000312255 bam 20.6 GB
EGAF50000312256 bam 15.6 GB
EGAF50000312257 bam 14.3 GB
EGAF50000312258 bam 14.4 GB
EGAF50000312259 bam 18.6 GB
EGAF50000312260 bam 18.1 GB
EGAF50000312261 bam 20.6 GB
EGAF50000312262 bam 17.1 GB
EGAF50000312263 bam 23.7 GB
EGAF50000312264 bam 17.2 GB
EGAF50000312265 bam 11.0 GB
EGAF50000312266 bam 12.7 GB
EGAF50000312267 bam 11.5 GB
EGAF50000312268 bam 14.4 GB
EGAF50000312269 bam 16.9 GB
EGAF50000312270 bam 13.6 GB
EGAF50000312271 bam 11.5 GB
EGAF50000312272 bam 10.6 GB
EGAF50000312273 bam 9.9 GB
EGAF50000312274 bam 19.1 GB
EGAF50000312275 bam 11.1 GB
EGAF50000312276 bam 2.5 GB
EGAF50000312277 bam 18.1 GB
EGAF50000312278 bam 28.0 GB
EGAF50000312279 bam 3.4 GB
EGAF50000312280 bam 1.7 GB
EGAF50000312281 bam 9.5 GB
EGAF50000312282 bam 1.1 GB
EGAF50000312283 bam 21.3 GB
EGAF50000312284 bam 14.1 GB
EGAF50000312285 bam 16.7 GB
EGAF50000312286 bam 15.7 GB
EGAF50000312287 bam 20.4 GB
EGAF50000312288 bam 21.1 GB
EGAF50000312289 bam 12.0 GB
EGAF50000312290 bam 20.1 GB
EGAF50000312291 bam 24.3 GB
EGAF50000312292 bam 13.5 GB
EGAF50000312293 bam 15.6 GB
EGAF50000312294 bam 15.7 GB
EGAF50000312295 bam 10.3 GB
EGAF50000312296 bam 12.2 GB
EGAF50000312297 bam 22.6 GB
EGAF50000312298 bam 15.0 GB
EGAF50000312299 bam 10.6 GB
EGAF50000312300 bam 12.5 GB
EGAF50000312301 bam 11.4 GB
EGAF50000312302 bam 13.3 GB
EGAF50000312303 bam 12.4 GB
EGAF50000312304 bam 15.3 GB
EGAF50000312305 bam 14.4 GB
EGAF50000312306 bam 21.6 GB
EGAF50000312307 bam 13.7 GB
EGAF50000312308 bam 10.1 GB
EGAF50000312309 bam 7.2 GB
EGAF50000312310 bam 12.0 GB
EGAF50000312311 bam 14.0 GB
EGAF50000312312 bam 23.4 GB
EGAF50000312313 bam 18.0 GB
EGAF50000312314 bam 16.1 GB
EGAF50000312315 bam 17.3 GB
EGAF50000312316 bam 19.8 GB
EGAF50000312317 bam 17.4 GB
EGAF50000312318 bam 18.9 GB
EGAF50000312319 bam 26.5 GB
EGAF50000312320 bam 14.4 GB
EGAF50000312321 bam 9.1 GB
EGAF50000312322 bam 13.0 GB
EGAF50000312323 bam 12.3 GB
EGAF50000312324 bam 13.7 GB
EGAF50000312325 bam 14.1 GB
EGAF50000312326 bam 18.8 GB
EGAF50000312327 bam 14.5 GB
EGAF50000312328 bam 9.7 GB
EGAF50000312329 bam 16.0 GB
EGAF50000312330 bam 11.0 GB
EGAF50000312331 bam 21.0 GB
EGAF50000312332 bam 12.3 GB
EGAF50000312333 bam 15.8 GB
EGAF50000312334 bam 16.3 GB
EGAF50000312335 bam 16.4 GB
EGAF50000312336 bam 14.3 GB
EGAF50000312337 bam 12.2 GB
EGAF50000312338 bam 11.0 GB
EGAF50000312339 bam 18.4 GB
EGAF50000312340 bam 12.2 GB
EGAF50000312341 bam 17.5 GB
EGAF50000312342 bam 21.8 GB
EGAF50000312343 bam 19.5 GB
EGAF50000312344 bam 15.4 GB
EGAF50000312345 bam 7.5 GB
EGAF50000312346 bam 8.3 GB
EGAF50000312347 bam 19.1 GB
EGAF50000312348 bam 11.9 GB
EGAF50000312349 bam 13.3 GB
EGAF50000312350 bam 11.8 GB
EGAF50000312351 bam 8.8 GB
EGAF50000312352 bam 16.5 GB
153 Files (2.4 TB)