About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Purified vs unpurified stem cell-islets

A scRNAseq dataset consisting of stem cell-derived islets treated with gradient separation (HUES8_Pure_Islets) and unpurified control (HUES8_control_islets). scRNAseq was done on cryopreserved stage 7 stem cell (HUES8 cell line)-derived islets. Details about stem cell differentiation and sequencing can be found on the publication by Rajaei et al. (2025, Science Translational Medicine). This dataset correspond to Fig 4 of the publication.

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Islet Group Leiden access policy

Each request for data access will be reviewed first. If approved, data will be made available after a Data Access Agreement (DAA) has been signed.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000905 Transcriptome Analysis

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000349229 fastq.gz 868.2 MB
EGAF50000349230 fastq.gz 359.7 MB
EGAF50000349231 fastq.gz 5.2 GB
EGAF50000349232 fastq.gz 11.3 GB
EGAF50000349233 fastq.gz 5.6 GB
EGAF50000349234 fastq.gz 12.3 GB
EGAF50000349235 fastq.gz 406.7 MB
EGAF50000349236 fastq.gz 999.4 MB
8 Files (37.2 GB)