About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Indonesian Microbiome Ecology and Evolution v1 (raw data)

This dataset comprises 124 human faecal samples collected across Indonesia between 2015 and 2021, together with 6 controls. It was collected to study patterns of human microbiome variation across Indonesia’s diverse geography and lifestyles, and to generate the Indonesian Microbiome Ecology and Evolution (IndoMEE) metagenome-assembled genome (MAG) reference database. The dataset consists of 250 bp paired-end metagenomic reads from 124 faecal samples acquired from 116 individuals, at ca. 10.6 Gb / sample, together with 2 positive controls (ZymoBIOMICS Microbial Community DNA Standard by Zymo Research Cat# D6305), and 4 negative controls (for sampling: Blank, for extraction: Buffer EB by Qiagen Cat# 19086, for library prep: Nuclease Free Water by Ambion-Invitrogen Cat# AM9937). Library preparation was carried out using Illumina's TruSeq DNA Nano DNA kit, and sequencing was performed on the Illumina NovaSeq 6000 platform.

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Indonesian Microbiome Ecology and Evolution v1 - Data Access Policy

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000961 Metagenomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000349730 fastq.gz 2.8 GB
EGAF50000349731 fastq.gz 2.8 GB
EGAF50000349732 fastq.gz 2.8 GB
EGAF50000349733 fastq.gz 2.9 GB
EGAF50000349734 fastq.gz 3.0 GB
EGAF50000349735 fastq.gz 31.6 MB
EGAF50000349736 fastq.gz 33.6 MB
EGAF50000349737 fastq.gz 2.8 GB
EGAF50000349738 fastq.gz 3.1 GB
EGAF50000349739 fastq.gz 2.5 GB
EGAF50000349740 fastq.gz 3.2 GB
EGAF50000349741 fastq.gz 3.2 GB
EGAF50000349742 fastq.gz 2.4 GB
EGAF50000349743 fastq.gz 6.6 GB
EGAF50000349744 fastq.gz 6.5 GB
EGAF50000349745 fastq.gz 2.9 GB
EGAF50000349746 fastq.gz 3.1 GB
EGAF50000349747 fastq.gz 3.1 GB
EGAF50000349748 fastq.gz 2.8 GB
EGAF50000349749 fastq.gz 3.4 GB
EGAF50000349750 fastq.gz 3.6 GB
EGAF50000349751 fastq.gz 3.3 GB
EGAF50000349752 fastq.gz 2.2 GB
EGAF50000349753 fastq.gz 2.2 GB
EGAF50000349754 fastq.gz 2.9 GB
EGAF50000349755 fastq.gz 2.6 GB
EGAF50000349756 fastq.gz 2.9 GB
EGAF50000349757 fastq.gz 2.4 GB
EGAF50000349758 fastq.gz 2.5 GB
EGAF50000349759 fastq.gz 3.1 GB
EGAF50000349760 fastq.gz 2.6 GB
EGAF50000349761 fastq.gz 3.2 GB
EGAF50000349762 fastq.gz 3.3 GB
EGAF50000349763 fastq.gz 2.6 GB
EGAF50000349764 fastq.gz 3.0 GB
EGAF50000349765 fastq.gz 2.9 GB
EGAF50000349766 fastq.gz 3.0 GB
EGAF50000349767 fastq.gz 3.2 GB
EGAF50000349768 fastq.gz 2.4 GB
EGAF50000349769 fastq.gz 2.6 GB
EGAF50000349770 fastq.gz 2.6 GB
EGAF50000349771 fastq.gz 2.8 GB
EGAF50000349772 fastq.gz 2.8 GB
EGAF50000349773 fastq.gz 3.3 GB
EGAF50000349774 fastq.gz 3.1 GB
EGAF50000349775 fastq.gz 3.1 GB
EGAF50000349776 fastq.gz 2.9 GB
EGAF50000349777 fastq.gz 2.8 GB
EGAF50000349778 fastq.gz 2.8 GB
EGAF50000349779 fastq.gz 2.7 GB
EGAF50000349780 fastq.gz 2.8 GB
EGAF50000349781 fastq.gz 3.0 GB
EGAF50000349782 fastq.gz 2.8 GB
EGAF50000349783 fastq.gz 2.7 GB
EGAF50000349784 fastq.gz 2.6 GB
EGAF50000349785 fastq.gz 3.7 GB
EGAF50000349786 fastq.gz 2.8 GB
EGAF50000349787 fastq.gz 2.9 GB
EGAF50000349788 fastq.gz 3.5 GB
EGAF50000349789 fastq.gz 3.5 GB
EGAF50000349790 fastq.gz 2.6 GB
EGAF50000349791 fastq.gz 2.6 GB
EGAF50000349792 fastq.gz 3.2 GB
EGAF50000349793 fastq.gz 2.5 GB
EGAF50000349794 fastq.gz 2.5 GB
EGAF50000349795 fastq.gz 2.9 GB
EGAF50000349796 fastq.gz 3.0 GB
EGAF50000349797 fastq.gz 3.1 GB
EGAF50000349798 fastq.gz 2.7 GB
EGAF50000349799 fastq.gz 2.8 GB
EGAF50000349800 fastq.gz 2.9 GB
EGAF50000349801 fastq.gz 2.7 GB
EGAF50000349802 fastq.gz 2.0 GB
EGAF50000349803 fastq.gz 2.0 GB
EGAF50000349804 fastq.gz 2.3 GB
EGAF50000349805 fastq.gz 2.3 GB
EGAF50000349806 fastq.gz 2.7 GB
EGAF50000349807 fastq.gz 3.6 GB
EGAF50000349808 fastq.gz 2.7 GB
EGAF50000349809 fastq.gz 2.8 GB
EGAF50000349810 fastq.gz 3.0 GB
EGAF50000349811 fastq.gz 2.5 GB
EGAF50000349812 fastq.gz 3.2 GB
EGAF50000349813 fastq.gz 2.9 GB
EGAF50000349814 fastq.gz 2.9 GB
EGAF50000349815 fastq.gz 3.1 GB
EGAF50000349816 fastq.gz 3.0 GB
EGAF50000349817 fastq.gz 3.0 GB
EGAF50000349818 fastq.gz 3.8 GB
EGAF50000349819 fastq.gz 3.9 GB
EGAF50000349820 fastq.gz 2.8 GB
EGAF50000349821 fastq.gz 3.6 GB
EGAF50000349822 fastq.gz 3.6 GB
EGAF50000349823 fastq.gz 3.0 GB
EGAF50000349824 fastq.gz 2.7 GB
EGAF50000349825 fastq.gz 3.3 GB
EGAF50000349826 fastq.gz 2.7 GB
EGAF50000349827 fastq.gz 2.3 GB
EGAF50000349828 fastq.gz 2.6 GB
EGAF50000349829 fastq.gz 2.7 GB
EGAF50000349830 fastq.gz 2.3 GB
EGAF50000349831 fastq.gz 2.8 GB
EGAF50000349832 fastq.gz 2.7 GB
EGAF50000349833 fastq.gz 2.6 GB
EGAF50000349834 fastq.gz 4.2 GB
EGAF50000349835 fastq.gz 2.6 GB
EGAF50000349836 fastq.gz 3.6 GB
EGAF50000349837 fastq.gz 2.7 GB
EGAF50000349838 fastq.gz 3.1 GB
EGAF50000349839 fastq.gz 2.9 GB
EGAF50000349840 fastq.gz 2.9 GB
EGAF50000349841 fastq.gz 957.0 MB
EGAF50000349842 fastq.gz 2.2 GB
EGAF50000349843 fastq.gz 3.2 GB
EGAF50000349844 fastq.gz 2.8 GB
EGAF50000349845 fastq.gz 2.6 GB
EGAF50000349846 fastq.gz 3.2 GB
EGAF50000349847 fastq.gz 2.5 GB
EGAF50000349848 fastq.gz 2.8 GB
EGAF50000349849 fastq.gz 2.6 GB
EGAF50000349850 fastq.gz 2.9 GB
EGAF50000349851 fastq.gz 3.4 GB
EGAF50000349852 fastq.gz 3.0 GB
EGAF50000349853 fastq.gz 3.3 GB
EGAF50000349854 fastq.gz 3.0 GB
EGAF50000349855 fastq.gz 3.0 GB
EGAF50000349856 fastq.gz 2.7 GB
EGAF50000349857 fastq.gz 2.7 GB
EGAF50000349858 fastq.gz 2.7 GB
EGAF50000349859 fastq.gz 2.8 GB
EGAF50000349860 fastq.gz 3.0 GB
EGAF50000349861 fastq.gz 2.4 GB
EGAF50000349862 fastq.gz 2.4 GB
EGAF50000349863 fastq.gz 4.3 GB
EGAF50000349864 fastq.gz 2.3 GB
EGAF50000349865 fastq.gz 3.2 GB
EGAF50000349866 fastq.gz 3.3 GB
EGAF50000349867 fastq.gz 2.8 GB
EGAF50000349868 fastq.gz 2.9 GB
EGAF50000349869 fastq.gz 3.2 GB
EGAF50000349870 fastq.gz 3.3 GB
EGAF50000349871 fastq.gz 2.9 GB
EGAF50000349872 fastq.gz 2.9 GB
EGAF50000349873 fastq.gz 2.7 GB
EGAF50000349874 fastq.gz 5.1 MB
EGAF50000349875 fastq.gz 2.9 GB
EGAF50000349876 fastq.gz 2.6 GB
EGAF50000349877 fastq.gz 2.6 GB
EGAF50000349878 fastq.gz 2.7 GB
EGAF50000349879 fastq.gz 4.3 GB
EGAF50000349880 fastq.gz 3.2 GB
EGAF50000349881 fastq.gz 3.2 GB
EGAF50000349882 fastq.gz 2.9 GB
EGAF50000349883 fastq.gz 2.2 GB
EGAF50000349884 fastq.gz 2.6 GB
EGAF50000349885 fastq.gz 2.5 GB
EGAF50000349886 fastq.gz 2.5 GB
EGAF50000349887 fastq.gz 2.8 GB
EGAF50000349888 fastq.gz 2.6 GB
EGAF50000349889 fastq.gz 2.7 GB
EGAF50000349890 fastq.gz 2.8 GB
EGAF50000349891 fastq.gz 3.0 GB
EGAF50000349892 fastq.gz 2.7 GB
EGAF50000349893 fastq.gz 2.6 GB
EGAF50000349894 fastq.gz 3.1 GB
EGAF50000349895 fastq.gz 2.5 GB
EGAF50000349896 fastq.gz 3.1 GB
EGAF50000349897 fastq.gz 3.1 GB
EGAF50000349898 fastq.gz 2.7 GB
EGAF50000349899 fastq.gz 2.7 GB
EGAF50000349900 fastq.gz 2.9 GB
EGAF50000349901 fastq.gz 2.8 GB
EGAF50000349902 fastq.gz 3.6 GB
EGAF50000349903 fastq.gz 3.3 GB
EGAF50000349904 fastq.gz 4.0 GB
EGAF50000349905 fastq.gz 2.4 GB
EGAF50000349906 fastq.gz 2.7 GB
EGAF50000349907 fastq.gz 2.4 GB
EGAF50000349908 fastq.gz 2.4 GB
EGAF50000349909 fastq.gz 3.0 GB
EGAF50000349910 fastq.gz 3.3 GB
EGAF50000349911 fastq.gz 3.3 GB
EGAF50000349912 fastq.gz 2.8 GB
EGAF50000349913 fastq.gz 2.8 GB
EGAF50000349914 fastq.gz 2.8 GB
EGAF50000349915 fastq.gz 3.0 GB
EGAF50000349916 fastq.gz 3.7 GB
EGAF50000349917 fastq.gz 2.9 GB
EGAF50000349918 fastq.gz 2.9 GB
EGAF50000349919 fastq.gz 2.6 GB
EGAF50000349920 fastq.gz 2.8 GB
EGAF50000349921 fastq.gz 2.9 GB
EGAF50000349922 fastq.gz 3.3 GB
EGAF50000349923 fastq.gz 2.4 GB
EGAF50000349924 fastq.gz 2.4 GB
EGAF50000349925 fastq.gz 4.5 GB
EGAF50000349926 fastq.gz 4.5 GB
EGAF50000349927 fastq.gz 3.0 GB
EGAF50000349928 fastq.gz 2.5 GB
EGAF50000349929 fastq.gz 2.8 GB
EGAF50000349930 fastq.gz 2.8 GB
EGAF50000349931 fastq.gz 2.4 GB
EGAF50000349932 fastq.gz 2.9 GB
EGAF50000349933 fastq.gz 2.9 GB
EGAF50000349934 fastq.gz 2.8 GB
EGAF50000349935 fastq.gz 2.9 GB
EGAF50000349936 fastq.gz 2.8 GB
EGAF50000349937 fastq.gz 2.7 GB
EGAF50000349938 fastq.gz 2.6 GB
EGAF50000349939 fastq.gz 2.7 GB
EGAF50000349940 fastq.gz 2.7 GB
EGAF50000349941 fastq.gz 3.1 GB
EGAF50000349942 fastq.gz 2.6 GB
EGAF50000349943 fastq.gz 3.1 GB
EGAF50000349944 fastq.gz 2.8 GB
EGAF50000349945 fastq.gz 2.8 GB
EGAF50000349946 fastq.gz 3.2 GB
EGAF50000349947 fastq.gz 2.4 GB
EGAF50000349948 fastq.gz 2.4 GB
EGAF50000349949 fastq.gz 2.7 GB
EGAF50000349950 fastq.gz 2.7 GB
EGAF50000349951 fastq.gz 959.4 kB
EGAF50000349952 fastq.gz 1.0 MB
EGAF50000349953 fastq.gz 5.2 MB
EGAF50000349954 fastq.gz 2.6 MB
EGAF50000349955 fastq.gz 2.7 MB
EGAF50000349956 fastq.gz 1.2 MB
EGAF50000349957 fastq.gz 1.6 MB
EGAF50000349958 fastq.gz 2.7 GB
EGAF50000349959 fastq.gz 2.7 GB
EGAF50000349960 fastq.gz 2.6 GB
EGAF50000349961 fastq.gz 956.5 MB
EGAF50000349962 fastq.gz 3.1 GB
EGAF50000349963 fastq.gz 2.3 GB
EGAF50000349964 fastq.gz 2.9 GB
EGAF50000349965 fastq.gz 2.8 GB
EGAF50000349966 fastq.gz 2.5 GB
EGAF50000349967 fastq.gz 3.5 GB
EGAF50000349968 fastq.gz 2.7 GB
EGAF50000349969 fastq.gz 2.7 GB
EGAF50000349970 fastq.gz 4.1 GB
EGAF50000349971 fastq.gz 2.4 GB
EGAF50000349972 fastq.gz 2.9 GB
EGAF50000349973 fastq.gz 2.7 GB
EGAF50000349974 fastq.gz 2.7 GB
EGAF50000349975 fastq.gz 2.7 GB
EGAF50000349976 fastq.gz 2.7 GB
EGAF50000349977 fastq.gz 2.3 GB
EGAF50000349978 fastq.gz 2.9 GB
EGAF50000349979 fastq.gz 3.3 GB
EGAF50000349980 fastq.gz 2.8 GB
EGAF50000349981 fastq.gz 2.9 GB
EGAF50000349982 fastq.gz 2.9 GB
EGAF50000349983 fastq.gz 3.0 GB
EGAF50000349984 fastq.gz 3.0 GB
EGAF50000349985 fastq.gz 2.6 GB
EGAF50000349986 fastq.gz 4.3 GB
EGAF50000349987 fastq.gz 2.6 GB
EGAF50000349988 fastq.gz 3.1 GB
EGAF50000349989 fastq.gz 2.6 GB
260 Files (725.5 GB)