(RNA-seq) Shifted assembly and function of mSWI/SNF family subcomplexes underlie targetable dependencies in endometriod carcinomas
Raw and processed RNA-seq data from a patient-derived xenograft (yielding 18 samples) and the VOA1066 undifferentiated endometrial carcinoma cell-line (yielding 15 samples). PDX samples were treater with either compound-14, dBRD9, or were untreated. VOA1066 samples were treated with either compound-12, dBRD9, or were untreated. Samples were sequenced on an Illumina NextSeq 500 using 37-bp single-end sequencing. Raw fastq files and gene count tables are included for each sample.
- 06/08/2025
- 33 samples
- DAC: EGAC00000000011
- Technology: NextSeq 500
DUO:0000025 version: 2021-02-23
time limit on use
This data use modifier indicates that use is approved for a specific number of months.
BC Cancer, part of the Provincial Health Services Authority - Data Access Policy
Access to this data is controlled. There are a number of steps that a researcher must take to obtain access to this data, including execution of a Data Access Agreement between the institutions. The process is overseen by the Technology Development Office; please contact our general email address TDOadmin@phsa.ca. Please only click the "request data" button on the EGA website after a Data Access Agreement is fully executed.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000001004 | Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
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|---|---|---|---|---|
| EGAF50000371216 | fastq.gz | 437.1 MB |
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| EGAF50000371217 | fastq.gz | 1.8 GB |
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| EGAF50000371224 | fastq.gz | 1.8 GB |
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| EGAF50000371225 | fastq.gz | 1.5 GB |
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| EGAF50000371228 | fastq.gz | 1.6 GB |
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| EGAF50000371233 | fastq.gz | 1.8 GB |
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| EGAF50000371234 | fastq.gz | 2.2 GB |
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| EGAF50000371235 | fastq.gz | 1.6 GB |
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| EGAF50000371236 | fastq.gz | 1.7 GB |
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| EGAF50000371237 | fastq.gz | 1.3 GB |
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| EGAF50000371239 | fastq.gz | 1.3 GB |
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| EGAF50000371240 | fastq.gz | 1.4 GB |
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| EGAF50000371241 | fastq.gz | 1.2 GB |
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| EGAF50000371242 | fastq.gz | 1.3 GB |
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| EGAF50000371245 | fastq.gz | 1.7 GB |
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| EGAF50000371248 | fastq.gz | 1.3 GB |
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| EGAF50000371250 | fastq.gz | 1.3 GB |
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| EGAF50000371252 | fastq.gz | 1.7 GB |
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| EGAF50000371253 | fastq.gz | 1.2 GB |
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| EGAF50000371254 | fastq.gz | 1.4 GB |
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| EGAF50000371259 | fastq.gz | 1.6 GB |
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| EGAF50000371260 | fastq.gz | 1.4 GB |
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| EGAF50000371265 | fastq.gz | 1.3 GB |
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| EGAF50000371273 | fastq.gz | 1.7 GB |
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| EGAF50000371274 | fastq.gz | 1.3 GB |
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| EGAF50000371275 | fastq.gz | 1.4 GB |
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| EGAF50000371276 | fastq.gz | 1.4 GB |
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| EGAF50000371277 | fastq.gz | 1.3 GB |
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| EGAF50000371278 | fastq.gz | 1.4 GB |
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| EGAF50000371279 | fastq.gz | 1.2 GB |
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| EGAF50000371280 | fastq.gz | 1.2 GB |
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| EGAF50000371281 | fastq.gz | 1.3 GB |
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| EGAF50000371282 | fastq.gz | 1.3 GB |
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| EGAF50000371339 | tab | 429.4 kB |
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| EGAF50000371340 | tab | 409.6 kB |
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| EGAF50000371341 | tab | 411.5 kB |
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| EGAF50000371342 | tab | 412.2 kB |
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| EGAF50000371343 | tab | 411.6 kB |
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| EGAF50000371344 | tab | 412.4 kB |
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| EGAF50000371345 | tab | 414.5 kB |
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| EGAF50000371346 | tab | 412.5 kB |
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| EGAF50000371347 | tab | 412.6 kB |
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| EGAF50000371348 | tab | 436.4 kB |
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| EGAF50000371349 | tab | 411.2 kB |
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| EGAF50000371350 | tab | 410.6 kB |
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| EGAF50000371351 | tab | 410.6 kB |
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| EGAF50000371352 | tab | 411.8 kB |
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| EGAF50000371353 | tab | 412.9 kB |
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| EGAF50000371354 | tab | 417.1 kB |
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| EGAF50000371355 | tab | 418.6 kB |
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| EGAF50000371356 | tab | 415.7 kB |
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| EGAF50000371357 | tab | 419.8 kB |
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| EGAF50000371358 | tab | 420.0 kB |
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| EGAF50000371359 | tab | 418.9 kB |
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| EGAF50000371360 | tab | 435.5 kB |
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| EGAF50000371361 | tab | 435.9 kB |
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| EGAF50000371362 | tab | 433.7 kB |
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| EGAF50000371363 | tab | 438.3 kB |
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| EGAF50000371364 | tab | 425.9 kB |
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| EGAF50000371365 | tab | 434.7 kB |
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| EGAF50000371366 | tab | 411.9 kB |
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| EGAF50000371367 | tab | 410.0 kB |
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| EGAF50000371368 | tab | 412.8 kB |
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| EGAF50000371369 | tab | 411.7 kB |
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| EGAF50000371370 | tab | 410.6 kB |
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| EGAF50000371371 | tab | 411.6 kB |
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| 66 Files (47.3 GB) | ||||