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As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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(ATAC-seq) Shifted assembly and function of mSWI/SNF family subcomplexes underlie targetable dependencies in endometriod carcinomas

Raw and processed ATAC-seq data from the VOA1066 undifferentiated endometrial carcinoma cell-line (10 samples). Samples were treated with DMSO, dBRD9, or compound 12, without doxycycline; some samples instead received doxycycline-induced ARID1A treatment, or doxycycline alone. Samples were sequenced on Illumina NextSeq 500 using 37 bp paired-end sequencing parameters. Raw fastq fastq files, bigwig files giving normalized genomic coverage per region, and called broad peaks are included for each sample.

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DUO:0000025
version: 2021-02-23

time limit on use

This data use modifier indicates that use is approved for a specific number of months.

BC Cancer, part of the Provincial Health Services Authority - Data Access Policy

Access to this data is controlled. There are a number of steps that a researcher must take to obtain access to this data, including execution of a Data Access Agreement between the institutions. The process is overseen by the Technology Development Office; please contact our general email address TDOadmin@phsa.ca. Please only click the "request data" button on the EGA website after a Data Access Agreement is fully executed.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001004 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000371212 fastq.gz 3.6 GB
EGAF50000371218 fastq.gz 869.3 MB
EGAF50000371221 fastq.gz 3.4 GB
EGAF50000371222 fastq.gz 3.4 GB
EGAF50000371243 fastq.gz 263.3 MB
EGAF50000371244 fastq.gz 2.2 GB
EGAF50000371246 fastq.gz 3.5 GB
EGAF50000371247 fastq.gz 1.4 GB
EGAF50000371251 fastq.gz 1.2 GB
EGAF50000371257 fastq.gz 1.2 GB
EGAF50000371258 fastq.gz 2.5 GB
EGAF50000371262 fastq.gz 1.2 GB
EGAF50000371264 fastq.gz 2.0 GB
EGAF50000371266 fastq.gz 868.4 MB
EGAF50000371267 fastq.gz 1.4 GB
EGAF50000371268 fastq.gz 2.2 GB
EGAF50000371269 fastq.gz 1.2 GB
EGAF50000371270 fastq.gz 2.5 GB
EGAF50000371271 fastq.gz 3.6 GB
EGAF50000371272 fastq.gz 3.6 GB
EGAF50000371283 bw 263.7 MB
EGAF50000371284 bw 178.8 MB
EGAF50000371285 broadPeak 6.9 MB
EGAF50000371286 bw 281.6 MB
EGAF50000371287 broadPeak 7.7 MB
EGAF50000371288 bw 212.3 MB
EGAF50000371289 bw 172.5 MB
EGAF50000371290 broadPeak 5.9 MB
EGAF50000371291 broadPeak 6.5 MB
EGAF50000371292 bw 215.0 MB
EGAF50000371293 bw 275.3 MB
EGAF50000371294 broadPeak 7.7 MB
EGAF50000371295 bw 268.7 MB
EGAF50000371296 broadPeak 7.0 MB
EGAF50000371297 broadPeak 6.7 MB
EGAF50000371298 bw 255.3 MB
EGAF50000371299 broadPeak 9.3 MB
EGAF50000371300 broadPeak 5.4 MB
EGAF50000371301 bw 258.9 MB
EGAF50000371302 broadPeak 15.8 MB
40 Files (44.4 GB)