About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
Need Help?

(ChIP-seq) Shifted assembly and function of mSWI/SNF family subcomplexes underlie targetable dependencies in endometriod carcinomas

ChIP-seq data of 18 samples from the VOA1066 undifferentiated endometrial carcinoma cell-line with various pulldowns: BRG1 (abcam, ab110642, GR3255117-11), BRD9 (CST, E4Q3F, Lot 1), ARID1A (CST, D2A8U, Lot 4), SS18 (CST, D6I4Z, Lot 1), PBRM1 (CST, D3F70, Lot 3), GLTSCR1 (CST, E6I3A, Lot 1), H3K27ac (CST, C36B11, Lot 16), or none. Sample were either untreated or received doxycycline-induced ARID1A treatment. Samples were sequenced on Illumina NextSeq 500 using 37 bp single-end sequencing parameters. Raw fastq files, along with processed bigwig files containing normalized genomic coverage, and called narrow peaks, are included for each sample.

Request Access

DUO:0000025
version: 2021-02-23

time limit on use

This data use modifier indicates that use is approved for a specific number of months.

BC Cancer, part of the Provincial Health Services Authority - Data Access Policy

Access to this data is controlled. There are a number of steps that a researcher must take to obtain access to this data, including execution of a Data Access Agreement between the institutions. The process is overseen by the Technology Development Office; please contact our general email address TDOadmin@phsa.ca. Please only click the "request data" button on the EGA website after a Data Access Agreement is fully executed.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001004 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000371213 fastq.gz 1.7 GB
EGAF50000371214 fastq.gz 2.2 GB
EGAF50000371215 fastq.gz 511.8 MB
EGAF50000371219 fastq.gz 1.7 GB
EGAF50000371220 fastq.gz 2.3 GB
EGAF50000371223 fastq.gz 1.4 GB
EGAF50000371226 fastq.gz 2.5 GB
EGAF50000371227 fastq.gz 1.2 GB
EGAF50000371229 fastq.gz 1.9 GB
EGAF50000371230 fastq.gz 1.4 GB
EGAF50000371231 fastq.gz 1.2 GB
EGAF50000371232 fastq.gz 854.1 MB
EGAF50000371238 fastq.gz 2.5 GB
EGAF50000371249 fastq.gz 2.3 GB
EGAF50000371255 fastq.gz 2.4 GB
EGAF50000371256 fastq.gz 2.4 GB
EGAF50000371261 fastq.gz 1.8 GB
EGAF50000371263 fastq.gz 542.9 MB
EGAF50000371303 bw 158.6 MB
EGAF50000371304 bw 146.9 MB
EGAF50000371305 narrowPeak 3.3 MB
EGAF50000371306 bw 73.4 MB
EGAF50000371307 bw 109.4 MB
EGAF50000371308 narrowPeak 3.8 MB
EGAF50000371309 bw 31.0 MB
EGAF50000371310 bw 78.5 MB
EGAF50000371311 narrowPeak 4.8 MB
EGAF50000371312 narrowPeak 3.5 MB
EGAF50000371313 narrowPeak 2.2 MB
EGAF50000371314 bw 137.3 MB
EGAF50000371315 narrowPeak 2.4 MB
EGAF50000371316 bw 186.8 MB
EGAF50000371317 narrowPeak 1.2 MB
EGAF50000371318 bw 138.5 MB
EGAF50000371319 narrowPeak 61.4 kB
EGAF50000371320 bw 140.4 MB
EGAF50000371321 bw 141.9 MB
EGAF50000371322 narrowPeak 2.3 MB
EGAF50000371323 narrowPeak 4.7 MB
EGAF50000371324 bw 112.3 MB
EGAF50000371325 bw 141.0 MB
EGAF50000371326 narrowPeak 3.4 MB
EGAF50000371327 bw 112.2 MB
EGAF50000371328 narrowPeak 163.4 kB
EGAF50000371329 bw 139.8 MB
EGAF50000371330 narrowPeak 39.2 kB
EGAF50000371331 narrowPeak 61.8 kB
EGAF50000371332 narrowPeak 3.4 MB
EGAF50000371333 bw 45.4 MB
EGAF50000371334 narrowPeak 39.1 kB
EGAF50000371335 narrowPeak 2.5 MB
EGAF50000371336 bw 199.6 MB
EGAF50000371337 narrowPeak 1.7 MB
EGAF50000371338 bw 176.5 MB
54 Files (32.9 GB)