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WES in Angolan and Cape Verdean triple-negative breast cancer samples

WES (using the SureSelect Human All Exon V5 + UTRs target enrichment kit) in 23 Angolan and 7 Cape Verdean triple-negative breast cancer samples

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WES in Angolan and Cape Verdean triple-negative breast cancer samples

This document specifies the policy for granting access to the European Genome-phenome Archive (EGA) secure web based tools for managing data access permissions to the data stored in the EGA database. Access is granted to those named in this document by Paul Flicek, head of Genes, Genomes and Variation. Conditions of access: Unless otherwise stated, this account is provided for the purposes of accessing the EGA secure web based tools for managing data access permissions only. The account holder will abide by all current and future policies of the EBI for computer use as well as computer use policies of the European Molecular Biology Laboratory (EMBL), of which the EBI is a part. All EGA specific policies and standard operating procedures (SOPs) must also be followed. All applicable policies will be provided to the authorized users. Method of access: The EBI will create a personal account for the authorized person. The account username and password together with a SRA key provide access to the secure EGA infrastructure. A separate document with detailed guidelines on how to access and use these tools is provided to each account holder. The EGA help-desk provides training when needed. Review: All individuals will access to the EGA user authorization tools will be reviewed annually by Paul Flicek. Any staff changes affecting the authorized person must be provided immediately to Paul Flicek (flicek@ebi.ac.uk). Authorized Data Access Committee user and Supervisor: Luisa Pereira, Phd lpereira@ipatimup.pt

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001013 Exome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF50000378240 bam 6.0 GB
EGAF50000378241 bam 2.7 GB
EGAF50000378242 bam 7.4 GB
EGAF50000378243 bam 5.7 GB
EGAF50000378244 bam 6.4 GB
EGAF50000378245 bam 4.3 GB
EGAF50000378246 bam 5.6 GB
EGAF50000378247 bam 6.3 GB
EGAF50000378248 bam 6.7 GB
EGAF50000378249 bam 7.0 GB
EGAF50000378250 bam 4.4 GB
EGAF50000378251 bam 5.7 GB
EGAF50000378252 bam 7.8 GB
EGAF50000378253 bam 4.4 GB
EGAF50000378254 bam 6.5 GB
EGAF50000378255 bam 5.8 GB
EGAF50000378256 bam 5.2 GB
EGAF50000378257 bam 3.5 GB
EGAF50000378258 bam 6.3 GB
EGAF50000378259 bam 5.8 GB
EGAF50000378260 bam 6.8 GB
EGAF50000378261 bam 6.1 GB
EGAF50000378262 bam 5.2 GB
EGAF50000378263 bam 3.1 GB
EGAF50000378264 bam 4.8 GB
EGAF50000378265 bam 4.0 GB
EGAF50000378266 bam 7.3 GB
EGAF50000378267 bam 3.2 GB
EGAF50000378268 bam 6.6 GB
EGAF50000378269 bam 5.9 GB
EGAF50000378270 bam 5.0 GB
EGAF50000378271 bam 4.4 GB
EGAF50000378272 bam 5.9 GB
EGAF50000378273 bam 4.3 GB
EGAF50000378274 bam 5.9 GB
EGAF50000378275 bam 5.3 GB
EGAF50000378276 bam 4.7 GB
EGAF50000378277 bam 6.4 GB
EGAF50000378278 bam 5.4 GB
EGAF50000378279 bam 6.7 GB
EGAF50000378280 bam 6.4 GB
EGAF50000378281 bam 5.7 GB
EGAF50000378282 bam 5.0 GB
EGAF50000378283 bam 6.6 GB
EGAF50000378284 bam 6.2 GB
EGAF50000378285 bam 4.3 GB
46 Files (254.3 GB)