About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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NeoPAL study - RNAseq and Targeted DNA sequencing data

This dataset is composed of 159 RNAseq data (fastq, bam and count tables) and 35 targeted DNAseq data (fastq).

Request Access

Institut Curie Data Access Agreement - These terms and conditions govern access to the managed access datasets to which the User Institution has requested access. The User Institution agrees to be bound by these terms and conditions.

Definitions : - Authorised Personnel: The individuals at the User Institution to whom Institut Curie grants access to the Data. This includes the User, the individuals listed in Appendix II and any other individuals for whom the User Institution subsequently requests access to the Data. Details of the initial Authorised Personnel are set out in Appendix II. - Data: The managed access datasets to which the User Institution has requested access. - Data Producers: Institut Curie and the collaborators listed in Appendix I responsible for the development, organisation, and oversight of these Data. - External Collaborator: A collaborator of the User, working for an institution other than the User Institution. - Project: The project for which the User Institution has requested access to these Data. A description of the Project is set out in Appendix II. - Publications: Includes, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. - Research Participant: An individual whose data form part of these Data. - Research Purposes: Shall mean research that is seeking to advance the understanding of genetics and genomics, including the treatment of disorders, and work on statistical methods that may be applied to such research. - User: The principal investigator for the Project. - User Institution(s): The Institution that has requested access to the Data. 1. The User Institution agrees to only use these Data for the purpose of the Project (described in Appendix II) and only for Research Purposes. The User Institution further agrees that it will only use these Data for Research Purposes which are within the limitations (if any) set out in Appendix I. 2. The User Institution agrees to preserve, at all times, the confidentiality of these Data. In particular, it undertakes not to use, or attempt to use these Data to compromise or otherwise infringe the confidentiality of information on Research Participants. Without prejudice to the generality of the foregoing, the User Institution agrees to use at least the measures set out in Appendix I to protect these Data. 3. The User Institution agrees to protect the confidentiality of Research Participants in any research papers or publications that they prepare by taking all reasonable care to limit the possibility of identification. 4. The User Institution agrees not to link or combine these Data to other information or archived data available in a way that could re-identify the Research Participants, even if access to that data has been formally granted to the User Institution or is freely available without restriction. 5. The User Institution agrees only to transfer or disclose these Data, in whole or part, or any material derived from these Data, to the Authorised Personnel. Should the User Institution wish to share these Data with an External Collaborator, the External Collaborator must complete a separate application for access to these Data. 6. The User Institution agrees that the Data Producers, and all other parties involved in the creation, funding or protection of these Data: a) make no warranty or representation, express or implied as to the accuracy, quality or comprehensiveness of these Data; b) exclude to the fullest extent permitted by law all liability for actions, claims, proceedings, demands, losses (including but not limited to loss of profit), costs, awards damages and payments made by the Recipient that may arise (whether directly or indirectly) in any way whatsoever from the Recipient’s use of these Data or from the unavailability of, or break in access to, these Data for whatever reason and; c) bear no responsibility for the further analysis or interpretation of these Data. 7. The User Institution agrees to follow the Fort Lauderdale Guidelines (http://www.wellcome.ac.uk/stellent/groups/corporatesite/@policy_communications/documents/web_document/wtd003207.pdf ) and the Toronto Statement (http://www.nature.com/nature/journal/v461/n7261/full/461168a.html). This includes but is not limited to recognising the contribution of the Data Producers and including a proper acknowledgement in all reports or publications resulting from the use of these Data. 8. The User Institution agrees to follow the Publication Policy in Appendix III. This includes respecting the moratorium period for the Data Producers to publish the first peer-reviewed report describing and analysing these Data. 9. The User Institution agrees not to make intellectual property claims on these Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of these Data, or conclusion drawn directly from these Data. 10. The User Institution can elect to perform further research that would add intellectual and resource capital to these data and decide to obtain intellectual property rights on these downstream discoveries. In this case, the User Institution agrees to implement licensing policies that will not obstruct further research and to follow the U.S. National Institutes of Health Best Practices for the Licensing of Genomic Inventions (2005) (https://www.icgc.org/files/daco/NIH_BestPracticesLicensingGenomicInventions_2005_en.pdf ) in conformity with the Organisation for Economic Co-operation and Development Guidelines for the Licensing of the Genetic Inventions (2006) (http://www.oecd.org/science/biotech/36198812.pdf ). 11. The User Institution agrees to destroy/discard the Data held, once it is no longer used for the Project, unless obliged to retain the data for archival purposes in conformity with audit or legal requirements. 12. The User Institution will notify Institut Curie within 30 days of any changes or departures of Authorised Personnel. 13. The User Institution will notify Institut Curie prior to any significant changes to the protocol for the Project. 14. The User Institution will notify Institut Curie as soon as it becomes aware of a breach of the terms or conditions of this agreement. 15. Institut Curie may terminate this agreement by written notice to the User Institution. If this agreement terminates for any reason, the User Institution will be required to destroy any Data held, including copies and backup copies. This clause does not prevent the User Institution from retaining these data for archival purpose in conformity with audit or legal requirements. 16. The User Institution accepts that it may be necessary for the Data Producers to alter the terms of this agreement from time to time. As an example, this may include specific provisions relating to the Data required by Data Producers other than Institut Curie. In the event that changes are required, the Data Producers or their appointed agent will contact the User Institution to inform it of the changes and the User Institution may elect to accept the changes or terminate the agreement. 17. If requested, the User Institution will allow data security and management documentation to be inspected to verify that it is complying with the terms of this agreement. 18. The User Institution agrees to distribute a copy of these terms to the Authorised Personnel. The User Institution will procure that the Authorised Personnel comply with the terms of this agreement. 19. This agreement (and any dispute, controversy, proceedings or claim of whatever nature arising out of this agreement or its formation) shall be construed, interpreted and governed by the laws of France and shall be subject to the exclusive jurisdiction of the French courts. APPENDIX I – DATASET DETAILS APPENDIX II ––PROJECT DETAILS APPENDIX III –– PUBLICATION POLICY

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001021 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000379390 fastq.gz 611.1 MB
EGAF50000379391 fastq.gz 3.0 GB
EGAF50000379392 fastq.gz 3.6 GB
EGAF50000379393 fastq.gz 3.8 GB
EGAF50000379394 fastq.gz 4.0 GB
EGAF50000379395 fastq.gz 3.0 GB
EGAF50000379396 fastq.gz 3.9 GB
EGAF50000379397 fastq.gz 4.1 GB
EGAF50000379398 fastq.gz 3.4 GB
EGAF50000379399 fastq.gz 3.6 GB
EGAF50000379400 fastq.gz 3.9 GB
EGAF50000379401 fastq.gz 495.0 MB
EGAF50000379402 fastq.gz 534.1 MB
EGAF50000379403 fastq.gz 728.9 MB
EGAF50000379404 fastq.gz 416.6 MB
EGAF50000379405 fastq.gz 1.1 GB
EGAF50000379406 fastq.gz 3.1 GB
EGAF50000379407 fastq.gz 3.3 GB
EGAF50000379408 fastq.gz 3.5 GB
EGAF50000379409 fastq.gz 3.5 GB
EGAF50000379410 fastq.gz 3.4 GB
EGAF50000379411 fastq.gz 709.0 MB
EGAF50000379412 fastq.gz 404.8 MB
EGAF50000379413 fastq.gz 822.1 MB
EGAF50000379414 fastq.gz 499.2 MB
EGAF50000379415 fastq.gz 510.1 MB
EGAF50000379416 fastq.gz 496.9 MB
EGAF50000379417 fastq.gz 510.1 MB
EGAF50000379418 fastq.gz 3.1 GB
EGAF50000379419 fastq.gz 3.9 GB
EGAF50000379420 fastq.gz 3.6 GB
EGAF50000379421 fastq.gz 3.6 GB
EGAF50000379422 fastq.gz 3.4 GB
EGAF50000379423 fastq.gz 3.6 GB
EGAF50000379424 fastq.gz 762.0 MB
EGAF50000379425 fastq.gz 510.8 MB
EGAF50000379426 fastq.gz 488.0 MB
EGAF50000379427 fastq.gz 513.0 MB
EGAF50000379428 fastq.gz 922.5 MB
EGAF50000379429 fastq.gz 627.8 MB
EGAF50000379430 fastq.gz 843.1 MB
EGAF50000379431 fastq.gz 1.0 GB
EGAF50000379432 fastq.gz 732.5 MB
EGAF50000379433 fastq.gz 1.1 GB
EGAF50000379434 fastq.gz 596.8 MB
EGAF50000379435 fastq.gz 580.2 MB
EGAF50000379436 fastq.gz 684.5 MB
EGAF50000379437 fastq.gz 556.4 MB
EGAF50000379438 fastq.gz 706.3 MB
EGAF50000379439 fastq.gz 666.1 MB
EGAF50000379440 fastq.gz 928.9 MB
EGAF50000379441 fastq.gz 599.2 MB
EGAF50000379442 fastq.gz 552.5 MB
EGAF50000379443 fastq.gz 587.7 MB
EGAF50000379444 fastq.gz 712.2 MB
EGAF50000379445 fastq.gz 642.2 MB
EGAF50000379446 fastq.gz 629.3 MB
EGAF50000379447 fastq.gz 478.4 MB
EGAF50000379448 fastq.gz 747.4 MB
EGAF50000379449 fastq.gz 555.1 MB
EGAF50000379450 fastq.gz 627.3 MB
EGAF50000379451 fastq.gz 570.3 MB
EGAF50000379452 fastq.gz 484.9 MB
EGAF50000379453 fastq.gz 3.2 GB
EGAF50000379454 fastq.gz 3.8 GB
EGAF50000379455 fastq.gz 640.7 MB
EGAF50000379456 fastq.gz 604.5 MB
EGAF50000379457 fastq.gz 793.4 MB
EGAF50000379458 fastq.gz 633.4 MB
EGAF50000379459 fastq.gz 633.5 MB
EGAF50000379460 fastq.gz 3.4 GB
EGAF50000379461 fastq.gz 3.2 GB
EGAF50000379462 fastq.gz 3.3 GB
EGAF50000379463 fastq.gz 3.5 GB
EGAF50000379464 fastq.gz 3.4 GB
EGAF50000379465 fastq.gz 3.6 GB
EGAF50000379466 fastq.gz 3.7 GB
EGAF50000379467 fastq.gz 3.9 GB
EGAF50000379468 fastq.gz 3.7 GB
EGAF50000379469 fastq.gz 2.9 GB
EGAF50000379470 fastq.gz 3.4 GB
EGAF50000379471 fastq.gz 3.5 GB
EGAF50000379472 fastq.gz 3.6 GB
EGAF50000379473 fastq.gz 3.9 GB
EGAF50000379474 fastq.gz 4.1 GB
EGAF50000379475 fastq.gz 4.1 GB
EGAF50000379476 fastq.gz 4.2 GB
EGAF50000379477 fastq.gz 3.7 GB
EGAF50000379478 fastq.gz 3.8 GB
EGAF50000379479 fastq.gz 3.8 GB
EGAF50000379480 fastq.gz 3.3 GB
EGAF50000379481 fastq.gz 3.5 GB
EGAF50000379482 fastq.gz 3.5 GB
EGAF50000379483 fastq.gz 3.6 GB
EGAF50000379484 fastq.gz 4.0 GB
EGAF50000379485 fastq.gz 3.4 GB
EGAF50000379486 fastq.gz 3.6 GB
EGAF50000379487 fastq.gz 3.7 GB
EGAF50000379488 fastq.gz 3.3 GB
EGAF50000379489 R2 3.4 GB
EGAF50000379490 fastq.gz 3.3 GB
EGAF50000379491 fastq.gz 3.4 GB
EGAF50000379492 fastq.gz 737.4 MB
EGAF50000379493 fastq.gz 684.8 MB
EGAF50000379494 fastq.gz 708.2 MB
EGAF50000379495 fastq.gz 661.6 MB
EGAF50000379496 fastq.gz 700.2 MB
EGAF50000379497 fastq.gz 536.7 MB
EGAF50000379498 fastq.gz 475.1 MB
EGAF50000379499 fastq.gz 521.2 MB
EGAF50000379500 fastq.gz 498.9 MB
EGAF50000379501 fastq.gz 619.1 MB
EGAF50000379502 fastq.gz 706.5 MB
EGAF50000379503 fastq.gz 623.1 MB
EGAF50000379504 fastq.gz 477.5 MB
EGAF50000379505 fastq.gz 484.2 MB
EGAF50000379506 fastq.gz 405.2 MB
EGAF50000379507 fastq.gz 513.5 MB
EGAF50000379508 fastq.gz 740.7 MB
EGAF50000379509 fastq.gz 669.1 MB
EGAF50000379510 fastq.gz 610.2 MB
EGAF50000379511 fastq.gz 589.6 MB
EGAF50000379512 fastq.gz 515.6 MB
EGAF50000379513 fastq.gz 479.0 MB
EGAF50000379514 fastq.gz 642.8 MB
EGAF50000379515 fastq.gz 526.9 MB
EGAF50000379516 fastq.gz 632.3 MB
EGAF50000379517 fastq.gz 554.0 MB
EGAF50000379518 fastq.gz 498.3 MB
EGAF50000379519 fastq.gz 726.2 MB
EGAF50000379520 fastq.gz 710.6 MB
EGAF50000379521 fastq.gz 651.3 MB
EGAF50000379522 fastq.gz 685.0 MB
EGAF50000379523 fastq.gz 518.4 MB
EGAF50000379524 fastq.gz 592.3 MB
EGAF50000379525 fastq.gz 696.8 MB
EGAF50000379526 fastq.gz 585.4 MB
EGAF50000379527 fastq.gz 1.1 GB
EGAF50000379528 fastq.gz 583.2 MB
EGAF50000379529 fastq.gz 760.6 MB
EGAF50000379530 fastq.gz 606.5 MB
EGAF50000379531 fastq.gz 554.5 MB
EGAF50000379532 fastq.gz 590.5 MB
EGAF50000379533 fastq.gz 616.8 MB
EGAF50000379534 fastq.gz 591.6 MB
EGAF50000379535 fastq.gz 933.4 MB
EGAF50000379536 fastq.gz 599.8 MB
EGAF50000379537 fastq.gz 779.5 MB
EGAF50000379538 fastq.gz 616.6 MB
EGAF50000379539 fastq.gz 547.6 MB
EGAF50000379540 fastq.gz 713.3 MB
EGAF50000379541 fastq.gz 548.9 MB
EGAF50000379542 fastq.gz 809.7 MB
EGAF50000379543 fastq.gz 605.2 MB
EGAF50000379544 fastq.gz 546.3 MB
EGAF50000379545 fastq.gz 615.8 MB
EGAF50000379546 fastq.gz 601.0 MB
EGAF50000379547 fastq.gz 507.1 MB
EGAF50000379548 fastq.gz 589.3 MB
EGAF50000379549 fastq.gz 531.3 MB
EGAF50000379550 fastq.gz 548.5 MB
EGAF50000379551 fastq.gz 499.0 MB
EGAF50000379552 fastq.gz 563.9 MB
EGAF50000379553 fastq.gz 500.1 MB
EGAF50000379554 fastq.gz 545.8 MB
EGAF50000379555 fastq.gz 504.0 MB
EGAF50000379556 fastq.gz 652.9 MB
EGAF50000379557 fastq.gz 623.9 MB
EGAF50000379558 fastq.gz 554.4 MB
EGAF50000379559 fastq.gz 427.8 MB
EGAF50000379560 fastq.gz 530.6 MB
EGAF50000379561 fastq.gz 3.5 GB
EGAF50000379562 fastq.gz 3.8 GB
EGAF50000379563 fastq.gz 3.5 GB
EGAF50000379564 fastq.gz 587.4 MB
EGAF50000379565 fastq.gz 569.8 MB
EGAF50000379566 fastq.gz 567.2 MB
EGAF50000379567 fastq.gz 585.2 MB
EGAF50000379568 fastq.gz 506.6 MB
EGAF50000379569 fastq.gz 733.7 MB
EGAF50000379570 fastq.gz 748.5 MB
EGAF50000379571 fastq.gz 518.8 MB
EGAF50000379572 fastq.gz 557.0 MB
EGAF50000379573 fastq.gz 556.3 MB
EGAF50000379574 fastq.gz 593.0 MB
EGAF50000379575 fastq.gz 519.8 MB
EGAF50000379576 fastq.gz 576.9 MB
EGAF50000379577 fastq.gz 518.4 MB
EGAF50000379578 fastq.gz 568.0 MB
EGAF50000379579 fastq.gz 589.4 MB
EGAF50000379580 fastq.gz 653.4 MB
EGAF50000379581 fastq.gz 636.7 MB
EGAF50000379582 fastq.gz 761.2 MB
EGAF50000379583 fastq.gz 531.3 MB
EGAF50000379584 fastq.gz 535.8 MB
EGAF50000379585 fastq.gz 721.3 MB
EGAF50000379586 fastq.gz 507.3 MB
EGAF50000379587 fastq.gz 464.4 MB
EGAF50000379588 fastq.gz 1.5 GB
EGAF50000379589 fastq.gz 717.7 MB
EGAF50000379590 fastq.gz 592.3 MB
EGAF50000379591 fastq.gz 717.0 MB
EGAF50000379592 fastq.gz 744.3 MB
EGAF50000379593 fastq.gz 667.4 MB
EGAF50000379594 fastq.gz 805.2 MB
EGAF50000379595 fastq.gz 769.3 MB
EGAF50000379596 fastq.gz 579.5 MB
EGAF50000379597 fastq.gz 3.0 GB
EGAF50000379598 fastq.gz 4.2 GB
EGAF50000379599 fastq.gz 4.4 GB
EGAF50000379600 fastq.gz 619.3 MB
EGAF50000379601 fastq.gz 536.6 MB
EGAF50000379602 fastq.gz 564.2 MB
EGAF50000379603 fastq.gz 3.7 GB
EGAF50000379604 fastq.gz 1.0 GB
EGAF50000379605 fastq.gz 564.8 MB
EGAF50000379606 fastq.gz 717.2 MB
EGAF50000379607 fastq.gz 573.4 MB
EGAF50000379608 fastq.gz 756.5 MB
EGAF50000379609 fastq.gz 875.5 MB
EGAF50000379610 fastq.gz 701.4 MB
EGAF50000379611 fastq.gz 650.1 MB
EGAF50000379612 fastq.gz 458.4 MB
EGAF50000379613 fastq.gz 628.8 MB
EGAF50000379614 fastq.gz 490.6 MB
EGAF50000379615 fastq.gz 3.6 GB
EGAF50000379616 fastq.gz 3.8 GB
EGAF50000379617 fastq.gz 496.3 MB
EGAF50000379618 fastq.gz 443.5 MB
229 Files (333.4 GB)