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LongVar low-coverage data

This dataset includes sequencing data from participants of the LongVar study. Specifically, it comprises low-coverage whole genome sequencing (WGS) data which was derived from cell-free DNA from blood samples. These data were generated to compare imputation accuracy. 133 individuals agreed to share their data, and are healthy volunteers.

Request Access

LongVar data policy

Please contact dac@uzleuven.be for data access. The procedure described below always applies to re-use transfer of genomic or genetic data that are in an external database. This external database can be the European Genome-phenome Archive (EGA). When a researcher receives requests for reuse of data, or when the database requires an intervention of a data access committee, the DAC will assess these requests for reuse and transfer of genomic or genetic data by third parties. Patient consent to research participation (ICF) and compatibility with new data processing should be checked. An application should be submitted at dac@uzleuven.be. So applications for re-use of genomic/genomic data go through the DAC. In the first place, DAC performs a front desk function here. An application form should be completed by the applicant. To begin with, the DAC employee then checks the ICF and its compatibility with further use. The DAC employee also ensures that a check is made with the competent services to ensure that there are no legal impediments. If i) there are possible commercial interests (commercial use of the data by the recipient or the requesting party is a commercial party), ii) the researcher does not agree, or iii) there is some ambiguity about potential risks of the data transfer (e.g. violation (GDPR) legislation, identity of recipient party, use of the data), the question is referred to the DAC advisory board.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001114 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF50000400853 bam 732.1 MB
EGAF50000400854 bam 997.9 MB
EGAF50000400855 bam 756.4 MB
EGAF50000400856 bam 1.1 GB
EGAF50000400857 bam 1.1 GB
EGAF50000400858 bam 1.0 GB
EGAF50000400859 bam 876.7 MB
EGAF50000400860 bam 1.2 GB
EGAF50000400861 bam 1.1 GB
EGAF50000400862 bam 1.0 GB
EGAF50000400863 bam 1.3 GB
EGAF50000400864 bam 1.1 GB
EGAF50000400865 bam 981.3 MB
EGAF50000400866 bam 1.0 GB
EGAF50000400867 bam 961.4 MB
EGAF50000400868 bam 1.4 GB
EGAF50000400869 bam 899.4 MB
EGAF50000400870 bam 1.1 GB
EGAF50000400871 bam 806.1 MB
EGAF50000400872 bam 876.7 MB
EGAF50000400873 bam 1.0 GB
EGAF50000400874 bam 773.6 MB
EGAF50000400875 bam 889.3 MB
EGAF50000400876 bam 993.4 MB
EGAF50000400877 bam 898.7 MB
EGAF50000400878 bam 1.1 GB
EGAF50000400879 bam 1.3 GB
EGAF50000400880 bam 952.8 MB
EGAF50000400881 bam 1.3 GB
EGAF50000400882 bam 1.2 GB
EGAF50000400883 bam 1.2 GB
EGAF50000400884 bam 1.2 GB
EGAF50000400885 bam 1.1 GB
EGAF50000400886 bam 1.2 GB
EGAF50000400887 bam 922.8 MB
EGAF50000400888 bam 1.0 GB
EGAF50000400889 bam 1.2 GB
EGAF50000400890 bam 1.1 GB
EGAF50000400891 bam 1.2 GB
EGAF50000400892 bam 918.7 MB
EGAF50000400893 bam 4.9 GB
EGAF50000400894 bam 1.3 GB
EGAF50000400895 bam 1.1 GB
EGAF50000400896 bam 862.2 MB
EGAF50000400897 bam 1.2 GB
EGAF50000400898 bam 1.1 GB
EGAF50000400899 bam 1.1 GB
EGAF50000400900 bam 908.8 MB
EGAF50000400901 bam 954.4 MB
EGAF50000400902 bam 1.3 GB
EGAF50000400903 bam 1.1 GB
EGAF50000400904 bam 986.1 MB
EGAF50000400905 bam 1.1 GB
EGAF50000400906 bam 652.2 MB
EGAF50000400907 bam 1.2 GB
EGAF50000400908 bam 1.1 GB
EGAF50000400909 bam 1.0 GB
EGAF50000400910 bam 1.1 GB
EGAF50000400911 bam 1.1 GB
EGAF50000400912 bam 1.1 GB
EGAF50000400913 bam 1.1 GB
EGAF50000400914 bam 1.1 GB
EGAF50000400915 bam 1.1 GB
EGAF50000400916 bam 1.2 GB
EGAF50000400917 bam 1.2 GB
EGAF50000400918 bam 1.2 GB
EGAF50000400919 bam 1.1 GB
EGAF50000400920 bam 1.2 GB
EGAF50000400921 bam 992.3 MB
EGAF50000400922 bam 1.2 GB
EGAF50000400923 bam 1.1 GB
EGAF50000400924 bam 1.3 GB
EGAF50000400925 bam 1.0 GB
EGAF50000400926 bam 1.2 GB
EGAF50000400927 bam 1.2 GB
EGAF50000400928 bam 1.1 GB
EGAF50000400929 bam 1.3 GB
EGAF50000400930 bam 959.2 MB
EGAF50000400931 bam 724.0 MB
EGAF50000400932 bam 1.2 GB
EGAF50000400933 bam 1.2 GB
EGAF50000400934 bam 1.0 GB
EGAF50000400935 bam 987.3 MB
EGAF50000400936 bam 1.2 GB
EGAF50000400937 bam 1.3 GB
EGAF50000400938 bam 1.0 GB
EGAF50000400939 bam 1.2 GB
EGAF50000400940 bam 1.4 GB
EGAF50000400941 bam 1.1 GB
EGAF50000400942 bam 1.0 GB
EGAF50000400943 bam 806.8 MB
EGAF50000400944 bam 960.2 MB
EGAF50000400945 bam 946.8 MB
EGAF50000400946 bam 876.4 MB
EGAF50000400947 bam 907.0 MB
EGAF50000400948 bam 1.0 GB
EGAF50000400949 bam 887.5 MB
EGAF50000400950 bam 1.2 GB
EGAF50000400951 bam 1.0 GB
EGAF50000400952 bam 829.4 MB
EGAF50000400953 bam 966.7 MB
EGAF50000400954 bam 897.3 MB
EGAF50000400955 bam 819.8 MB
EGAF50000400956 bam 1.3 GB
EGAF50000400957 bam 843.6 MB
EGAF50000400958 bam 1.0 GB
EGAF50000400959 bam 1.4 GB
EGAF50000400960 bam 983.3 MB
EGAF50000400961 bam 970.4 MB
EGAF50000400962 bam 1.2 GB
EGAF50000400963 bam 1.1 GB
EGAF50000400964 bam 1.0 GB
EGAF50000400965 bam 1.3 GB
EGAF50000400966 bam 1.1 GB
EGAF50000400967 bam 1.2 GB
EGAF50000400968 bam 1.1 GB
EGAF50000400969 bam 1.2 GB
EGAF50000400970 bam 1.8 GB
EGAF50000400971 bam 1.6 GB
EGAF50000400972 bam 1.8 GB
EGAF50000400973 bam 1.1 GB
EGAF50000400974 bam 845.9 MB
EGAF50000400975 bam 1.1 GB
EGAF50000400976 bam 899.7 MB
EGAF50000400977 bam 1.1 GB
EGAF50000400978 bam 1.2 GB
EGAF50000400979 bam 1.5 GB
EGAF50000400980 bam 1.3 GB
EGAF50000400981 bam 2.2 GB
EGAF50000400982 bam 1.7 GB
EGAF50000400983 bam 1.9 GB
EGAF50000400984 bam 2.2 GB
EGAF50000400985 bam 2.0 GB
133 Files (152.8 GB)