About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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scRNAseq dataset of myeloid cells from secondary lymphoid organs from lymphoma patients and controls

This dataset contains fastq files from scRNAseq dataset of myeloid cells from secondary lymphoid organs (lymph nodes and tonsil) from lymphoma patients (3 FL and 3 DLBCL) and controls (3 reactive tonsils and 3 reactive lymph nodes). For HTO libraries, demultiplexing barcodes are available in samples descriptions.

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Policy for DAC UMR Inserm U1236

Completion of a DAA by the applicant/s

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001135 Transcriptome Analysis

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000402476 fastq.gz 285.3 MB
EGAF50000402477 fastq.gz 437.5 MB
EGAF50000402478 fastq.gz 313.8 MB
EGAF50000402479 fastq.gz 469.3 MB
EGAF50000402480 fastq.gz 209.0 MB
EGAF50000402481 fastq.gz 310.9 MB
EGAF50000402482 fastq.gz 377.9 MB
EGAF50000402483 fastq.gz 547.1 MB
EGAF50000402484 fastq.gz 453.2 MB
EGAF50000402485 fastq.gz 657.0 MB
EGAF50000402486 fastq.gz 1.4 GB
EGAF50000402487 fastq.gz 3.3 GB
EGAF50000402488 fastq.gz 1.6 GB
EGAF50000402489 fastq.gz 3.7 GB
EGAF50000402490 fastq.gz 4.1 GB
EGAF50000402491 fastq.gz 1.7 GB
EGAF50000402492 fastq.gz 1.8 GB
EGAF50000402493 fastq.gz 4.5 GB
EGAF50000402494 fastq.gz 4.4 GB
EGAF50000402495 fastq.gz 1.8 GB
EGAF50000402496 fastq.gz 1.5 GB
EGAF50000402497 fastq.gz 3.6 GB
EGAF50000402498 fastq.gz 1.0 GB
EGAF50000402499 fastq.gz 2.5 GB
EGAF50000402500 fastq.gz 2.1 GB
EGAF50000402501 fastq.gz 5.1 GB
EGAF50000402502 fastq.gz 1.8 GB
EGAF50000402503 fastq.gz 4.3 GB
EGAF50000402504 fastq.gz 1.8 GB
EGAF50000402505 fastq.gz 4.3 GB
EGAF50000402506 fastq.gz 2.1 GB
EGAF50000402507 fastq.gz 5.0 GB
EGAF50000402508 fastq.gz 1.8 GB
EGAF50000402509 fastq.gz 4.4 GB
EGAF50000402510 fastq.gz 1.7 GB
EGAF50000402511 fastq.gz 4.0 GB
EGAF50000402512 fastq.gz 2.1 GB
EGAF50000402513 fastq.gz 5.1 GB
EGAF50000402514 fastq.gz 2.5 GB
EGAF50000402515 fastq.gz 6.1 GB
EGAF50000402516 fastq.gz 4.5 GB
EGAF50000402517 fastq.gz 1.8 GB
EGAF50000402518 fastq.gz 245.9 MB
EGAF50000402519 fastq.gz 535.5 MB
EGAF50000402520 fastq.gz 380.0 MB
EGAF50000402521 fastq.gz 839.0 MB
EGAF50000402522 fastq.gz 441.8 MB
EGAF50000402523 fastq.gz 972.0 MB
EGAF50000402524 fastq.gz 1.1 GB
EGAF50000402525 fastq.gz 488.1 MB
EGAF50000402526 fastq.gz 3.2 GB
EGAF50000402527 fastq.gz 7.6 GB
EGAF50000402528 fastq.gz 1.9 GB
EGAF50000402529 fastq.gz 4.6 GB
EGAF50000402530 fastq.gz 1.1 GB
EGAF50000402531 fastq.gz 2.7 GB
EGAF50000402532 fastq.gz 7.5 GB
EGAF50000402533 fastq.gz 3.1 GB
EGAF50000402534 fastq.gz 3.3 GB
EGAF50000402535 fastq.gz 1.4 GB
EGAF50000402536 fastq.gz 1.8 GB
EGAF50000402537 fastq.gz 4.4 GB
EGAF50000402538 fastq.gz 1.7 GB
EGAF50000402539 fastq.gz 4.1 GB
EGAF50000402540 fastq.gz 1.5 GB
EGAF50000402541 fastq.gz 3.6 GB
EGAF50000402542 fastq.gz 2.5 GB
EGAF50000402543 fastq.gz 6.6 GB
EGAF50000402544 fastq.gz 2.4 GB
EGAF50000402545 fastq.gz 6.0 GB
EGAF50000402546 fastq.gz 8.2 GB
EGAF50000402547 fastq.gz 3.3 GB
EGAF50000402548 fastq.gz 8.9 MB
EGAF50000402549 fastq.gz 20.8 MB
74 Files (189.0 GB)