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Clonal hematopoiesis detection in the INSPIRE trial cohort of Pembrolizumab in patients with metastatic solid tumours

Targeted DNA sequencing bam files from pre-treatment peripheral blood mononuclear cells collected from patients on the NCT02644369 Phase II trial of Pembrolizumab for metastatic solid tumours

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University health network data access commitee; EGAC00001000912

DATA ACCESS AGREEMENT These terms and conditions govern access to the managed access datasets (details of which are set out in Appendix I) to which the User Institution has requested access. The User Institution agrees to be bound by these terms and conditions. Definitions Authorized Personnel: The individuals at the User Institution to whom the Data Access Committee (DAC) grants access to the Data. This includes the User, and those individuals under the direct supervision of the User, as well as any other individuals listed in Appendix II. Details of the initial Authorized Personnel are set out in Appendix II. Data: The managed access datasets to which the User Institution has requested access, as is outlined in the Appendix 1 attached hereto. Data Producers: The Principal Investigator responsible for the creation of this Data and other investigators responsible for the creation of this Data. External Collaborator: A collaborator of the User, working for an institution other than the User Institution. Project: The project for which the User Institution has requested access to these Data. A description of the Project is set out in Appendix II. Publications: Includes, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. Research Participant: An individual whose data form part of these Data. Research Purposes: Shall mean research that is seeking to advance the understanding of genetics and genomics, including the treatment of disorders, and work on statistical methods that may be applied to such research. Research Ethics Board Approval shall mean approval of the Project by the User Institution’s research ethics board or other research ethics board or independent review board for whom said User Institution obtains research ethics approval(s). User: The principal investigator for the Project. User Institution(s): The Institution that has requested access to the Data. University Health Network: The University Health Network (UHN) is the largest clinical and research hospital in Canada. UHN is affiliated with the University of Toronto and is a member of the Toronto Academic Health Science Network. 1. The User Institution agrees to only use these Data for the purpose of the Project (described in Appendix II) within the Research Purposes, and only in accordance with Research Ethics Board Approval, and any conditions or restrictions imposed pursuant to such Research Ethics Board Approval. The User Institution further agrees that it will only use these Data for Research Purposes which are within the limitations (if any) set out in Appendix I. 2. The User Institution agrees to preserve, at all times, the confidentiality of these Data. In particular, it undertakes not to use, or attempt to use these Data to compromise or otherwise breach the anonymity of the Research Participants, including agreeing to not attempt to re-identify or contact any Research Participant. Without prejudice to the generality of the foregoing, the User Institution agrees to use at least the measures set out in Appendix I to protect the Data. Despite the confidentiality of the Data, the User Institution may publish aggregate data and other results arising from use of the Data and may refer to the Data by reference to the accession number(s) as documented in Appendix I in further support of any publication resulting from use of said Data. 3. The User Institution agrees to protect the confidentiality of Research Participants in any research papers or publications that they prepare by taking all reasonable care to limit the possibility of re-identification. 4. The User Institution agrees not to link or combine these Data to other information or archived data in a way that could re-identify the Research Participants, even if access to that other data has been formally granted to the User Institution or is freely available without restriction. 5. The User Institution agrees only to transfer or disclose these Data, in whole or part, or any material derived from these Data, to the Authorized Personnel. Should the User Institution wish to share these Data with an External Collaborator, the External Collaborator must complete a separate application for access to these Data and enter into a separate Data Access Agreement. 6. The User Institution agrees that the Data Producers, and all other parties involved in the creation, funding or provision of these Data: a) make no warranty or representation, express or implied as to the accuracy, quality or comprehensiveness of these Data; b) exclude to the fullest extent permitted by law all liability for actions, claims, proceedings, demands, losses (including but not limited to loss of profit), costs, awards damages and payments made by the Recipient that may arise (whether directly or indirectly) in any way whatsoever from the Recipient’s use of these Data or from the unavailability of, or break in access to, these Data for whatever reason and; c) bear no responsibility for the further analysis or interpretation of these Data. 7. The User Institution agrees recognize the contribution of the Data Producers and include a proper acknowledgement in all reports or publications resulting from the use of these Data. 8. The User Institution agrees to follow the Publication Policy in Appendix III. This includes respecting the moratorium period for the Data Producers to publish the first peer-reviewed report describing and analyzing these Data. 9. The User Institution agrees not to make intellectual property claims on these Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of these Data, or conclusion drawn directly from these Data. 10. The User Institution can elect to perform further research that would add intellectual and resource capital to these data and decide to obtain intellectual property rights on these downstream discoveries. 11. The User Institution agrees to destroy/delete the Data held, once it is no longer being used for the Project, or in the event that the User departs the User Institution or otherwise can no longer complete the Project, with the proviso that the User Institution can retain a copy of the Data for archival purposes only in conformity with audit or legal requirements. 12. The User Institution will notify the DAC within 30 days of any changes or departures of the User, at which point the Project will terminate and the User Institution delete or destroy the Data (as per Section 11) unless otherwise agreed by the DAC. 13. The User Institution will notify the DAC prior to any significant changes to the protocol for the Project. 14. The User Institution will notify the DAC as soon as it becomes aware of a breach of the terms or conditions of this agreement. 15. Either party may terminate this agreement by written notice to the other party. If this agreement terminates for any reason, the User Institution will be required to destroy any Data held, including copies and backup copies. This clause does not prevent the User Institution from retaining these data for archival purpose in conformity with audit or legal requirements. 16. The User Institution accepts that it may be necessary for the Data Producers to alter the terms of this agreement from time to time. In the event that changes are required, the Data Producers or their appointed agent will contact the User Institution to inform it of the changes and the User Institution may elect to accept the changes or terminate the agreement. 17. If requested, the User Institution will allow data security and management documentation to be inspected to verify that it is complying with the terms of this agreement. 18. The User Institution agrees to distribute a copy of these terms to the Authorized Personnel. The User Institution will procure that the Authorized Personnel comply with the terms of this agreement. 19. The Parties agree to remain silent on choice of law.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001191 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF50000417009 bam 2.9 MB
EGAF50000417010 bam 2.9 MB
EGAF50000417011 bam 6.4 MB
EGAF50000417012 bam 6.7 MB
EGAF50000417013 bam 3.0 MB
EGAF50000417014 bam 5.5 MB
EGAF50000417015 bam 37.2 MB
EGAF50000417016 bam 68.9 MB
EGAF50000417017 bam 94.2 MB
EGAF50000417018 bam 107.2 MB
EGAF50000417019 bam 118.8 MB
EGAF50000417020 bam 116.0 MB
EGAF50000417021 bam 120.3 MB
EGAF50000417022 bam 121.1 MB
EGAF50000417023 bam 106.0 MB
EGAF50000417024 bam 126.7 MB
EGAF50000417025 bam 123.7 MB
EGAF50000417026 bam 136.0 MB
EGAF50000417027 bam 119.7 MB
EGAF50000417028 bam 3.3 MB
EGAF50000417029 bam 3.5 MB
EGAF50000417030 bam 4.2 MB
EGAF50000417031 bam 5.5 MB
EGAF50000417032 bam 76.7 MB
EGAF50000417033 bam 80.4 MB
EGAF50000417034 bam 84.6 MB
EGAF50000417035 bam 116.8 MB
EGAF50000417036 bam 119.7 MB
EGAF50000417037 bam 132.5 MB
EGAF50000417040 bam 196.9 MB
EGAF50000417041 bam 5.0 MB
EGAF50000417042 bam 5.7 MB
EGAF50000417043 bam 181.8 MB
EGAF50000417044 bam 15.5 MB
EGAF50000417045 bam 226.6 MB
EGAF50000417046 bam 27.3 MB
EGAF50000417047 bam 234.0 MB
EGAF50000417048 bam 162.9 MB
EGAF50000417049 bam 159.6 MB
EGAF50000417050 bam 188.2 MB
EGAF50000417051 bam 227.3 MB
EGAF50000417052 bam 67.9 MB
EGAF50000417053 bam 77.3 MB
EGAF50000417054 bam 278.6 MB
EGAF50000417055 bam 210.0 MB
EGAF50000417056 bam 133.8 MB
EGAF50000417057 bam 160.5 MB
EGAF50000417058 bam 189.2 MB
EGAF50000417059 bam 189.4 MB
EGAF50000417060 bam 227.7 MB
EGAF50000417061 bam 9.5 MB
EGAF50000417062 bam 28.2 MB
EGAF50000417063 bam 94.9 MB
EGAF50000417064 bam 141.8 MB
EGAF50000417065 bam 127.4 MB
EGAF50000417066 bam 202.4 MB
EGAF50000417067 bam 200.6 MB
EGAF50000417068 bam 599.4 MB
EGAF50000417069 bam 388.2 MB
EGAF50000417070 bam 381.4 MB
EGAF50000417071 bam 142.2 MB
EGAF50000417072 bam 239.7 MB
EGAF50000417073 bam 415.4 MB
EGAF50000417074 bam 131.2 MB
EGAF50000417075 bam 300.7 MB
EGAF50000417076 bam 192.9 MB
EGAF50000417077 bam 275.7 MB
EGAF50000417078 bam 245.4 MB
EGAF50000417079 bam 408.2 MB
EGAF50000417080 bam 1.7 MB
EGAF50000417081 bam 7.3 MB
EGAF50000417082 bam 16.5 MB
EGAF50000417083 bam 27.0 MB
EGAF50000417084 bam 51.5 MB
EGAF50000417085 bam 64.2 MB
EGAF50000417086 bam 168.2 MB
EGAF50000417087 bam 183.3 MB
EGAF50000417088 bam 191.6 MB
EGAF50000417089 bam 155.4 MB
EGAF50000417090 bam 205.3 MB
EGAF50000417091 bam 138.4 MB
EGAF50000417092 bam 268.1 MB
EGAF50000417093 bam 82.1 MB
EGAF50000417094 bam 259.5 MB
EGAF50000417095 bam 278.9 MB
EGAF50000417096 bam 325.2 MB
EGAF50000417097 bam 212.4 MB
EGAF50000417098 bam 236.5 MB
EGAF50000417099 bam 379.7 MB
EGAF50000417100 bam 523.2 MB
EGAF50000417101 bam 527.7 MB
EGAF50000417102 bam 84.4 MB
EGAF50000417103 bam 80.5 MB
EGAF50000417104 bam 89.4 MB
EGAF50000417105 bam 140.0 MB
EGAF50000417106 bam 118.5 MB
EGAF50000417107 bam 136.8 MB
EGAF50000417108 bam 139.8 MB
EGAF50000417109 bam 184.1 MB
EGAF50000417110 bam 175.0 MB
EGAF50000417111 bam 183.9 MB
EGAF50000417112 bam 163.6 MB
EGAF50000417113 bam 237.5 MB
EGAF50000417114 bam 256.4 MB
EGAF50000417115 bam 315.7 MB
EGAF50000417116 bam 510.9 MB
EGAF50000417117 bam 85.4 MB
EGAF50000417118 bam 91.9 MB
EGAF50000417119 bam 99.6 MB
EGAF50000417120 bam 109.4 MB
EGAF50000417121 bam 109.9 MB
EGAF50000417122 bam 83.7 MB
EGAF50000417123 bam 137.0 MB
EGAF50000417124 bam 145.6 MB
EGAF50000417125 bam 141.0 MB
EGAF50000417126 bam 145.3 MB
EGAF50000417127 bam 181.0 MB
EGAF50000417128 bam 199.1 MB
EGAF50000417129 bam 217.6 MB
EGAF50000417130 bam 283.9 MB
EGAF50000417131 bam 82.9 MB
EGAF50000417132 bam 92.0 MB
EGAF50000417133 bam 146.7 MB
EGAF50000417134 bam 167.4 MB
EGAF50000417135 bam 165.0 MB
EGAF50000417136 bam 161.0 MB
EGAF50000417137 bam 187.7 MB
EGAF50000417138 bam 213.3 MB
EGAF50000417139 bam 218.9 MB
EGAF50000417140 bam 250.8 MB
EGAF50000417141 bam 280.4 MB
EGAF50000417142 bam 298.8 MB
EGAF50000417143 bam 335.5 MB
EGAF50000417144 bam 341.7 MB
EGAF50000417145 bam 3.2 MB
EGAF50000417146 bam 167.9 MB
EGAF50000417147 bam 180.3 MB
EGAF50000417148 bam 170.2 MB
EGAF50000417149 bam 176.9 MB
EGAF50000417150 bam 173.6 MB
EGAF50000417151 bam 160.7 MB
EGAF50000417152 bam 188.0 MB
EGAF50000417153 bam 228.5 MB
EGAF50000417154 bam 213.9 MB
EGAF50000417155 bam 257.3 MB
EGAF50000417156 bam 261.8 MB
EGAF50000417157 bam 257.6 MB
EGAF50000417158 bam 291.3 MB
EGAF50000417159 bam 269.9 MB
EGAF50000417160 bam 214.0 MB
EGAF50000417161 bam 100.7 MB
EGAF50000417162 bam 116.7 MB
EGAF50000417163 bam 120.9 MB
EGAF50000417164 bam 129.9 MB
EGAF50000417165 bam 131.2 MB
EGAF50000417166 bam 193.7 MB
EGAF50000417167 bam 189.1 MB
EGAF50000417168 bam 203.7 MB
EGAF50000417169 bam 231.4 MB
EGAF50000417170 bam 143.3 MB
EGAF50000417171 bam 268.9 MB
EGAF50000417172 bam 229.5 MB
EGAF50000417173 bam 363.9 MB
EGAF50000417174 bam 382.1 MB
EGAF50000417175 bam 430.1 MB
EGAF50000417176 bam 875.6 kB
EGAF50000417177 bam 100.9 MB
EGAF50000417178 bam 152.5 MB
EGAF50000417179 bam 201.1 MB
EGAF50000417180 bam 554.9 MB
EGAF50000417181 bam 391.3 MB
EGAF50000417182 bam 112.6 MB
EGAF50000417183 bam 119.1 MB
EGAF50000417184 bam 186.3 MB
EGAF50000417185 bam 399.4 MB
EGAF50000417186 bam 490.5 MB
176 Files (31.0 GB)