About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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RIP-SeqRaw data

This dataset contains 15 paired FASTQ files from the PTBP1 project. Sequencing data were generated using bulk directional RNA-seq and RIP-seq experiments performed on a NovaSeq 6000 platform (2×100 bp paired-end reads). The dataset comprises two groups of samples: controls and patients. For each group, both input and immunoprecipitated samples are available. Patient samples correspond to skin biopsies from individuals affected by a neurodevelopmental disorder associated with variable skeletal dysplasia and disproportionate short-limbed short stature.

Request Access

DUO:0000015
version: 2021-02-23

no general methods research

This data use modifier indicates that use does not allow methods development research (e.g., development of software or algorithms).

DUO:0000018
version: 2021-02-23

not for profit, non commercial use only

This data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.

DUO:0000021
version: 2021-02-23

ethics approval required

This data use modifier indicates that the requestor must provide documentation of local IRB/ERB approval.

DUO:0000025
version: 2021-02-23

time limit on use

This data use modifier indicates that use is approved for a specific number of months.

DUO:0000027
version: 2021-02-23

project specific restriction

This data use modifier indicates that use is limited to use within an approved project.

raw data acess

Access to raw data is limited to specific project due to human genetic iidentification ssues

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001210 Transcriptome Analysis

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000420357 fastq.gz 6.1 GB
EGAF50000420358 fastq.gz 6.1 GB
EGAF50000420359 fastq.gz 7.2 GB
EGAF50000420360 fastq.gz 7.3 GB
EGAF50000420361 fastq.gz 6.7 GB
EGAF50000420362 fastq.gz 6.8 GB
EGAF50000420363 fastq.gz 5.3 GB
EGAF50000420364 fastq.gz 5.4 GB
EGAF50000420365 fastq.gz 5.8 GB
EGAF50000420366 fastq.gz 5.9 GB
EGAF50000420367 fastq.gz 5.4 GB
EGAF50000420368 fastq.gz 5.5 GB
EGAF50000420369 fastq.gz 4.0 GB
EGAF50000420370 fastq.gz 4.0 GB
EGAF50000420371 fastq.gz 2.2 GB
EGAF50000420372 fastq.gz 2.1 GB
EGAF50000420373 fastq.gz 5.8 GB
EGAF50000420374 fastq.gz 6.0 GB
EGAF50000420375 fastq.gz 6.9 GB
EGAF50000420376 fastq.gz 7.1 GB
EGAF50000420377 fastq.gz 6.5 GB
EGAF50000420378 fastq.gz 6.6 GB
EGAF50000420379 fastq.gz 4.9 GB
EGAF50000420380 fastq.gz 4.8 GB
EGAF50000420381 fastq.gz 2.4 GB
EGAF50000420382 fastq.gz 2.3 GB
EGAF50000420383 fastq.gz 4.3 GB
EGAF50000420384 fastq.gz 4.4 GB
EGAF50000420385 fastq.gz 3.8 GB
EGAF50000420386 fastq.gz 3.9 GB
30 Files (155.7 GB)