About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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non-malignant plasma cfRNA

Dataset contains mRNA capture sequencing data from plasma of 125 different human donors: 88 patients with a non-malignant disease and 37 cancer-free controls. Samples were sequenced on a NovaSeq X and sequencing data is provided in FASTQ format.

Request Access

pan-cancer plasma RNA sequencing data access policy

DATA ACCESS AGREEMENT These terms and conditions govern access to the managed access datasets (details of which are set out in Appendix I) to which the User Institution has requested access. The User Institution agrees to be bound by these terms and conditions. Definitions Authorised Personnel: The individuals at the User Institution to whom XXXXX grants access to the Data. This includes the User, the individuals listed in Appendix II and any other individuals for whom the User Institution subsequently requests access to the Data. Details of the initial Authorised Personnel are set out in Appendix II. Data: The managed access datasets to which the User Institution has requested access. Data Producers: XXXXX and the collaborators listed in Appendix I responsible for the development, organisation, and oversight of these Data. External Collaborator: A collaborator of the User, working for an institution other than the User Institution. Project: The project for which the User Institution has requested access to these Data. A description of the Project is set out in Appendix II. Publications: Includes, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. Research Participant: An individual whose data form part of these Data. Research Purposes: Shall mean research that is seeking to advance the understanding of genetics and genomics, including the treatment of disorders, and work on statistical methods that may be applied to such research. User: The principal investigator for the Project. User Institution(s): The Institution that has requested access to the Data. XXXXX: Your Institution details here 1. The User Institution agrees to only use these Data for the purpose of the Project (described in Appendix II) and only for Research Purposes. The User Institution further agrees that it will only use these Data for Research Purposes which are within the limitations (if any) set out in Appendix I. 2. The User Institution agrees to preserve, at all times, the confidentiality of these Data. In particular, it undertakes not to use, or attempt to use these Data to compromise or otherwise infringe the confidentiality of information on Research Participants. Without prejudice to the generality of the foregoing, the User Institution agrees to use at least the measures set out in Appendix I to protect these Data. 3. The User Institution agrees to protect the confidentiality of Research Participants in any research papers or publications that they prepare by taking all reasonable care to limit the possibility of identification. 4. The User Institution agrees not to link or combine these Data to other information or archived data available in a way that could re-identify the Research Participants, even if access to that data has been formally granted to the User Institution or is freely available without restriction. 5. The User Institution agrees only to transfer or disclose these Data, in whole or part, or any material derived from these Data, to the Authorised Personnel. Should the User Institution wish to share these Data with an External Collaborator, the External Collaborator must complete a separate application for access to these Data. 6. The User Institution agrees that the Data Producers, and all other parties involved in the creation, funding or protection of these Data: a) make no warranty or representation, express or implied as to the accuracy, quality or comprehensiveness of these Data; b) exclude to the fullest extent permitted by law all liability for actions, claims, proceedings, demands, losses (including but not limited to loss of profit), costs, awards damages and payments made by the Recipient that may arise (whether directly or indirectly) in any way whatsoever from the Recipient’s use of these Data or from the unavailability of, or break in access to, these Data for whatever reason and; c) bear no responsibility for the further analysis or interpretation of these Data. 7. The User Institution agrees to follow the Fort Lauderdale Guidelines (http://www.wellcome.ac.uk/stellent/groups/corporatesite/@policy_communications/documents/web_document/wtd003207.pdf ) and the Toronto Statement (http://www.nature.com/nature/journal/v461/n7261/full/461168a.html). This includes but is not limited to recognising the contribution of the Data Producers and including a proper acknowledgement in all reports or publications resulting from the use of these Data. 8. The User Institution agrees to follow the Publication Policy in Appendix III. This includes respecting the moratorium period for the Data Producers to publish the first peer-reviewed report describing and analysing these Data. 9. The User Institution agrees not to make intellectual property claims on these Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of these Data, or conclusion drawn directly from these Data. 10. The User Institution can elect to perform further research that would add intellectual and resource capital to these data and decide to obtain intellectual property rights on these downstream discoveries. In this case, the User Institution agrees to implement licensing policies that will not obstruct further research and to follow the U.S. National Institutes of Health Best Practices for the Licensing of Genomic Inventions (2005) (https://www.govinfo.gov/app/details/FR-2005-04-11/05-7247 ) in conformity with the Organisation for Economic Co-operation and Development Guidelines for the Licensing of the Genetic Inventions (2006) (http://www.oecd.org/science/biotech/36198812.pdf ). 11. The User Institution agrees to destroy/discard the Data held, once it is no longer used for the Project, unless obliged to retain the data for archival purposes in conformity with audit or legal requirements. 12. The User Institution will notify XXXXX within 30 days of any changes or departures of Authorised Personnel. 13. The User Institution will notify XXXXX prior to any significant changes to the protocol for the Project. 14. The User Institution will notify XXXXX as soon as it becomes aware of a breach of the terms or conditions of this agreement. 15. XXXXX may terminate this agreement by written notice to the User Institution. If this agreement terminates for any reason, the User Institution will be required to destroy any Data held, including copies and backup copies. This clause does not prevent the User Institution from retaining these data for archival purpose in conformity with audit or legal requirements. 16. The User Institution accepts that it may be necessary for the Data Producers to alter the terms of this agreement from time to time. As an example, this may include specific provisions relating to the Data required by Data Producers other than XXXXX. In the event that changes are required, the Data Producers or their appointed agent will contact the User Institution to inform it of the changes and the User Institution may elect to accept the changes or terminate the agreement. 17. If requested, the User Institution will allow data security and management documentation to be inspected to verify that it is complying with the terms of this agreement. 18. The User Institution agrees to distribute a copy of these terms to the Authorised Personnel. The User Institution will procure that the Authorised Personnel comply with the terms of this agreement.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001264 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000431696 fastq.gz 361.9 MB
EGAF50000431697 fastq.gz 355.6 MB
EGAF50000431698 fastq.gz 1.6 GB
EGAF50000431699 fastq.gz 1.6 GB
EGAF50000431700 fastq.gz 567.0 MB
EGAF50000431701 fastq.gz 557.5 MB
EGAF50000431702 fastq.gz 551.4 MB
EGAF50000431703 fastq.gz 547.7 MB
EGAF50000431704 fastq.gz 345.4 MB
EGAF50000431705 fastq.gz 342.6 MB
EGAF50000431706 fastq.gz 627.6 MB
EGAF50000431707 fastq.gz 623.2 MB
EGAF50000431708 fastq.gz 1.2 GB
EGAF50000431709 fastq.gz 1.2 GB
EGAF50000432031 fastq.gz 685.8 MB
EGAF50000432032 fastq.gz 678.0 MB
EGAF50000432033 fastq.gz 1.2 GB
EGAF50000432034 fastq.gz 1.1 GB
EGAF50000432035 fastq.gz 819.7 MB
EGAF50000432036 fastq.gz 804.5 MB
EGAF50000432037 fastq.gz 963.1 MB
EGAF50000432038 fastq.gz 958.2 MB
EGAF50000432039 fastq.gz 955.1 MB
EGAF50000432040 fastq.gz 931.9 MB
EGAF50000432041 fastq.gz 734.9 MB
EGAF50000432042 fastq.gz 748.7 MB
EGAF50000432043 fastq.gz 2.0 GB
EGAF50000432044 fastq.gz 2.0 GB
EGAF50000432045 fastq.gz 845.7 MB
EGAF50000432046 fastq.gz 839.4 MB
EGAF50000432047 fastq.gz 1.3 GB
EGAF50000432048 fastq.gz 1.3 GB
EGAF50000432049 fastq.gz 426.0 MB
EGAF50000432050 fastq.gz 421.9 MB
EGAF50000432051 fastq.gz 1.1 GB
EGAF50000432052 fastq.gz 1.1 GB
EGAF50000432053 fastq.gz 1.3 GB
EGAF50000432054 fastq.gz 1.3 GB
EGAF50000432055 fastq.gz 723.7 MB
EGAF50000432056 fastq.gz 714.9 MB
EGAF50000432057 fastq.gz 877.6 MB
EGAF50000432058 fastq.gz 864.4 MB
EGAF50000432059 fastq.gz 987.7 MB
EGAF50000432060 fastq.gz 963.6 MB
EGAF50000432061 fastq.gz 499.3 MB
EGAF50000432062 fastq.gz 494.0 MB
EGAF50000432063 fastq.gz 1.2 GB
EGAF50000432064 fastq.gz 1.2 GB
EGAF50000432065 fastq.gz 774.2 MB
EGAF50000432066 fastq.gz 768.2 MB
EGAF50000432067 fastq.gz 678.0 MB
EGAF50000432068 fastq.gz 672.0 MB
EGAF50000432069 fastq.gz 103.7 MB
EGAF50000432070 fastq.gz 102.7 MB
EGAF50000432071 fastq.gz 501.0 MB
EGAF50000432072 fastq.gz 495.7 MB
EGAF50000432073 fastq.gz 991.5 MB
EGAF50000432074 fastq.gz 1.0 GB
EGAF50000432075 fastq.gz 505.6 MB
EGAF50000432076 fastq.gz 501.1 MB
EGAF50000432077 fastq.gz 2.6 GB
EGAF50000432078 fastq.gz 2.6 GB
EGAF50000432079 fastq.gz 816.7 MB
EGAF50000432080 fastq.gz 808.2 MB
EGAF50000432081 fastq.gz 1.2 GB
EGAF50000432082 fastq.gz 1.2 GB
EGAF50000432083 fastq.gz 573.9 MB
EGAF50000432084 fastq.gz 565.6 MB
EGAF50000432085 fastq.gz 1.2 GB
EGAF50000432086 fastq.gz 1.2 GB
EGAF50000432087 fastq.gz 375.7 MB
EGAF50000432088 fastq.gz 371.7 MB
EGAF50000432089 fastq.gz 1.3 GB
EGAF50000432090 fastq.gz 1.2 GB
EGAF50000432091 fastq.gz 643.7 MB
EGAF50000432092 fastq.gz 629.6 MB
EGAF50000432093 fastq.gz 572.7 MB
EGAF50000432094 fastq.gz 567.1 MB
EGAF50000432095 fastq.gz 1.4 GB
EGAF50000432096 fastq.gz 1.4 GB
EGAF50000432097 fastq.gz 1.7 GB
EGAF50000432098 fastq.gz 1.6 GB
EGAF50000432099 fastq.gz 1.1 GB
EGAF50000432100 fastq.gz 1.1 GB
EGAF50000432101 fastq.gz 1.6 GB
EGAF50000432102 fastq.gz 1.6 GB
EGAF50000432103 fastq.gz 1.6 GB
EGAF50000432104 fastq.gz 1.7 GB
EGAF50000432105 fastq.gz 1.9 GB
EGAF50000432106 fastq.gz 1.9 GB
EGAF50000432107 fastq.gz 1.4 GB
EGAF50000432108 fastq.gz 1.4 GB
EGAF50000432109 fastq.gz 849.9 MB
EGAF50000432110 fastq.gz 834.0 MB
EGAF50000432111 fastq.gz 856.6 MB
EGAF50000432112 fastq.gz 849.6 MB
EGAF50000432113 fastq.gz 733.5 MB
EGAF50000432114 fastq.gz 728.2 MB
EGAF50000432115 fastq.gz 859.5 MB
EGAF50000432116 fastq.gz 854.2 MB
EGAF50000432117 fastq.gz 400.9 MB
EGAF50000432118 fastq.gz 396.6 MB
EGAF50000432119 fastq.gz 866.1 MB
EGAF50000432120 fastq.gz 870.4 MB
EGAF50000432121 fastq.gz 1.4 GB
EGAF50000432122 fastq.gz 1.4 GB
EGAF50000432123 fastq.gz 412.5 MB
EGAF50000432124 fastq.gz 415.9 MB
EGAF50000432125 fastq.gz 1.3 GB
EGAF50000432126 fastq.gz 1.2 GB
EGAF50000432127 fastq.gz 608.5 MB
EGAF50000432128 fastq.gz 603.0 MB
EGAF50000432129 fastq.gz 1.2 GB
EGAF50000432130 fastq.gz 1.1 GB
EGAF50000432131 fastq.gz 1.1 GB
EGAF50000432132 fastq.gz 1.1 GB
EGAF50000432133 fastq.gz 847.1 MB
EGAF50000432134 fastq.gz 834.1 MB
EGAF50000432135 fastq.gz 221.5 MB
EGAF50000432136 fastq.gz 218.9 MB
EGAF50000432137 fastq.gz 1.0 GB
EGAF50000432138 fastq.gz 1.0 GB
EGAF50000432139 fastq.gz 605.1 MB
EGAF50000432140 fastq.gz 612.5 MB
EGAF50000432141 fastq.gz 1.3 GB
EGAF50000432142 fastq.gz 1.2 GB
EGAF50000432143 fastq.gz 1.1 GB
EGAF50000432144 fastq.gz 1.2 GB
EGAF50000432145 fastq.gz 1.4 GB
EGAF50000432146 fastq.gz 1.4 GB
EGAF50000432147 fastq.gz 81.6 MB
EGAF50000432148 fastq.gz 81.2 MB
EGAF50000432149 fastq.gz 974.5 MB
EGAF50000432150 fastq.gz 982.8 MB
EGAF50000432151 fastq.gz 404.0 MB
EGAF50000432152 fastq.gz 401.2 MB
EGAF50000432153 fastq.gz 1.1 GB
EGAF50000432154 fastq.gz 1.1 GB
EGAF50000432155 fastq.gz 364.5 MB
EGAF50000432156 fastq.gz 360.3 MB
EGAF50000432157 fastq.gz 494.9 MB
EGAF50000432158 fastq.gz 487.9 MB
EGAF50000432159 fastq.gz 688.3 MB
EGAF50000432160 fastq.gz 671.8 MB
EGAF50000432161 fastq.gz 690.2 MB
EGAF50000432162 fastq.gz 686.9 MB
EGAF50000432163 fastq.gz 1.0 GB
EGAF50000432164 fastq.gz 1.1 GB
EGAF50000432165 fastq.gz 729.1 MB
EGAF50000432166 fastq.gz 722.5 MB
EGAF50000432167 fastq.gz 1.2 GB
EGAF50000432168 fastq.gz 1.2 GB
EGAF50000432169 fastq.gz 664.0 MB
EGAF50000432170 fastq.gz 658.0 MB
EGAF50000432171 fastq.gz 948.4 MB
EGAF50000432172 fastq.gz 939.6 MB
EGAF50000432173 fastq.gz 1.1 GB
EGAF50000432174 fastq.gz 1.1 GB
EGAF50000432175 fastq.gz 992.2 MB
EGAF50000432176 fastq.gz 986.3 MB
EGAF50000432177 fastq.gz 363.8 MB
EGAF50000432178 fastq.gz 360.6 MB
EGAF50000432179 fastq.gz 1.9 GB
EGAF50000432180 fastq.gz 1.8 GB
EGAF50000432181 fastq.gz 724.2 MB
EGAF50000432182 fastq.gz 727.6 MB
EGAF50000432183 fastq.gz 709.8 MB
EGAF50000432184 fastq.gz 704.5 MB
EGAF50000432185 fastq.gz 1.2 GB
EGAF50000432186 fastq.gz 1.2 GB
EGAF50000432187 fastq.gz 799.5 MB
EGAF50000432188 fastq.gz 808.2 MB
EGAF50000432189 fastq.gz 1.2 GB
EGAF50000432190 fastq.gz 1.2 GB
EGAF50000432191 fastq.gz 450.0 MB
EGAF50000432192 fastq.gz 445.2 MB
EGAF50000432193 fastq.gz 948.1 MB
EGAF50000432194 fastq.gz 961.1 MB
EGAF50000432195 fastq.gz 790.0 MB
EGAF50000432196 fastq.gz 784.1 MB
EGAF50000432197 fastq.gz 1.3 GB
EGAF50000432198 fastq.gz 1.3 GB
EGAF50000432199 fastq.gz 1.3 GB
EGAF50000432200 fastq.gz 1.3 GB
EGAF50000432201 fastq.gz 356.0 MB
EGAF50000432202 fastq.gz 352.8 MB
EGAF50000432203 fastq.gz 609.5 MB
EGAF50000432204 fastq.gz 604.8 MB
EGAF50000432205 fastq.gz 672.1 MB
EGAF50000432206 fastq.gz 672.2 MB
EGAF50000432207 fastq.gz 834.8 MB
EGAF50000432208 fastq.gz 818.1 MB
EGAF50000432209 fastq.gz 1.1 GB
EGAF50000432210 fastq.gz 1.1 GB
EGAF50000432211 fastq.gz 1.2 GB
EGAF50000432212 fastq.gz 1.2 GB
EGAF50000432213 fastq.gz 589.7 MB
EGAF50000432214 fastq.gz 583.5 MB
EGAF50000432215 fastq.gz 1.1 GB
EGAF50000432216 fastq.gz 1.1 GB
EGAF50000432217 fastq.gz 1.3 GB
EGAF50000432218 fastq.gz 1.2 GB
EGAF50000432219 fastq.gz 554.2 MB
EGAF50000432220 fastq.gz 549.6 MB
EGAF50000432221 fastq.gz 336.7 MB
EGAF50000432222 fastq.gz 334.7 MB
EGAF50000432223 fastq.gz 373.7 MB
EGAF50000432224 fastq.gz 376.5 MB
EGAF50000432225 fastq.gz 1.4 GB
EGAF50000432226 fastq.gz 1.3 GB
EGAF50000432227 fastq.gz 621.2 MB
EGAF50000432228 fastq.gz 616.0 MB
EGAF50000432229 fastq.gz 1.4 GB
EGAF50000432230 fastq.gz 1.4 GB
EGAF50000432231 fastq.gz 1.2 GB
EGAF50000432232 fastq.gz 1.1 GB
EGAF50000432233 fastq.gz 1.0 GB
EGAF50000432234 fastq.gz 1.0 GB
EGAF50000432235 fastq.gz 539.7 MB
EGAF50000432236 fastq.gz 535.5 MB
EGAF50000432237 fastq.gz 869.6 MB
EGAF50000432238 fastq.gz 864.0 MB
EGAF50000432239 fastq.gz 1.6 GB
EGAF50000432240 fastq.gz 1.6 GB
EGAF50000432241 fastq.gz 661.7 MB
EGAF50000432242 fastq.gz 649.8 MB
EGAF50000432243 fastq.gz 1.2 GB
EGAF50000432244 fastq.gz 1.2 GB
EGAF50000432245 fastq.gz 1.5 GB
EGAF50000432246 fastq.gz 1.5 GB
EGAF50000432247 fastq.gz 416.7 MB
EGAF50000432248 fastq.gz 411.7 MB
EGAF50000432249 fastq.gz 1.1 GB
EGAF50000432250 fastq.gz 1.1 GB
EGAF50000432251 fastq.gz 1.0 GB
EGAF50000432252 fastq.gz 1.0 GB
EGAF50000432253 fastq.gz 669.9 MB
EGAF50000432254 fastq.gz 667.3 MB
EGAF50000432255 fastq.gz 608.6 MB
EGAF50000432256 fastq.gz 603.7 MB
EGAF50000432257 fastq.gz 532.7 MB
EGAF50000432258 fastq.gz 529.0 MB
EGAF50000432259 fastq.gz 579.7 MB
EGAF50000432260 fastq.gz 576.4 MB
EGAF50000432261 fastq.gz 1.5 GB
EGAF50000432262 fastq.gz 1.5 GB
EGAF50000432263 fastq.gz 763.8 MB
EGAF50000432264 fastq.gz 759.7 MB
EGAF50000432265 fastq.gz 920.7 MB
EGAF50000432266 fastq.gz 908.9 MB
250 Files (228.5 GB)