Whole genome sequencing data of pediatric hypodiploid B cell acute lymphoblastic leukemia
The dataset includes FASTQ and BAM files from diagnostic and matched remission (control) bone marrow samples of one hypodiploid ALL patient (ALLT-351). Sequencing library was made using NEB Next® Ultra™ DNA Library Prep Kit. Both diagnostic (60x) and remission (30x) samples were sequenced using HiSeq X.
- 07/10/2025
- 2 samples
- DAC: EGAC00001001551
- Technology: Illumina HiSeq X
Two PIs (Tampere/Kuopio) and a legal representative of the Tampere University Hospital
Data will be shared if the proposed project falls within the patient/caretaker consent
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000001305 | Whole Genome Sequencing |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
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| EGAF50000446273 | fq.gz | 3.6 GB |
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| EGAF50000446274 | fq.gz | 3.7 GB |
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| EGAF50000446275 | fq.gz | 3.6 GB |
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| EGAF50000446276 | fq.gz | 3.7 GB |
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| EGAF50000446277 | fq.gz | 3.6 GB |
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| EGAF50000446278 | fq.gz | 3.8 GB |
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| EGAF50000446279 | fq.gz | 3.7 GB |
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| EGAF50000446280 | fq.gz | 3.7 GB |
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| EGAF50000446281 | fq.gz | 3.7 GB |
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| EGAF50000446282 | fq.gz | 3.7 GB |
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| EGAF50000446283 | fq.gz | 3.7 GB |
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| EGAF50000446284 | fq.gz | 3.8 GB |
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| EGAF50000446285 | fq.gz | 4.0 GB |
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| EGAF50000446286 | fq.gz | 3.7 GB |
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| EGAF50000446287 | fq.gz | 3.8 GB |
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| EGAF50000446288 | fq.gz | 4.2 GB |
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| EGAF50000446289 | fq.gz | 3.9 GB |
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| EGAF50000446290 | fq.gz | 4.1 GB |
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| EGAF50000446291 | fq.gz | 4.0 GB |
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| EGAF50000446292 | fq.gz | 4.1 GB |
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| EGAF50000446293 | fq.gz | 4.0 GB |
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| EGAF50000446294 | fq.gz | 4.2 GB |
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| EGAF50000446295 | fq.gz | 29.4 GB |
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| EGAF50000446296 | fq.gz | 28.4 GB |
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| EGAF50000446297 | bam | 76.9 GB |
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| EGAF50000446298 | bai | 9.3 MB |
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| EGAF50000446299 | bai | 9.3 MB |
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| EGAF50000446300 | bam | 47.3 GB |
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| 28 Files (266.1 GB) | ||||