About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Tumor Whole-exome sequencing

20 tumor tissue WES data with paired cfDNA sWGS data. This data is used for concordance analysis between cfDNA-based and tissue-based CNA. The WES libraries were sequenced across 3 independent runs using multiple lanes.

Request Access

Netherlands Cancer Institute - Antoni van Leeuwenhoek (NKI-AVL) general policy

Data is available under reasonable request. All data requests will be reviewed by the NKI IRB and must be supported by the Principal Investigator of the study. The researcher will need to sign a data access agreement with the NKI after approval.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001308 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000446532 fastq.gz 2.1 GB
EGAF50000446533 fastq.gz 77.1 MB
EGAF50000446534 fastq.gz 2.1 GB
EGAF50000446535 fastq.gz 769.3 MB
EGAF50000446536 fastq.gz 753.7 MB
EGAF50000446537 fastq.gz 672.7 MB
EGAF50000446538 fastq.gz 702.3 MB
EGAF50000446539 fastq.gz 869.0 MB
EGAF50000446540 fastq.gz 48.5 MB
EGAF50000446541 fastq.gz 24.2 MB
EGAF50000446542 fastq.gz 48.7 MB
EGAF50000446543 fastq.gz 681.6 MB
EGAF50000446544 fastq.gz 643.5 MB
EGAF50000446545 fastq.gz 796.8 MB
EGAF50000446561 fastq.gz 2.1 GB
EGAF50000446562 fastq.gz 2.1 GB
EGAF50000446563 fastq.gz 596.5 MB
EGAF50000446564 fastq.gz 675.1 MB
EGAF50000446565 fastq.gz 1.9 GB
EGAF50000446734 fastq.gz 2.0 GB
EGAF50000446735 fastq.gz 75.7 MB
EGAF50000446736 fastq.gz 1.9 GB
EGAF50000446737 fastq.gz 1.9 GB
EGAF50000446738 fastq.gz 2.0 GB
EGAF50000446739 fastq.gz 2.3 GB
EGAF50000446740 fastq.gz 2.2 GB
EGAF50000446741 fastq.gz 1.8 GB
EGAF50000446742 fastq.gz 1.9 GB
EGAF50000446743 fastq.gz 2.2 GB
EGAF50000446744 fastq.gz 830.9 MB
EGAF50000446745 fastq.gz 578.8 MB
EGAF50000446746 fastq.gz 600.2 MB
EGAF50000446747 fastq.gz 638.6 MB
EGAF50000446748 fastq.gz 658.9 MB
EGAF50000446749 fastq.gz 2.8 GB
EGAF50000446750 fastq.gz 1.9 GB
EGAF50000446751 fastq.gz 675.0 MB
EGAF50000446752 fastq.gz 702.3 MB
EGAF50000446753 fastq.gz 583.9 MB
EGAF50000446754 fastq.gz 607.5 MB
EGAF50000446755 fastq.gz 616.9 MB
EGAF50000446756 fastq.gz 604.0 MB
EGAF50000446757 fastq.gz 421.7 MB
EGAF50000446758 fastq.gz 2.7 GB
EGAF50000446759 fastq.gz 2.8 GB
EGAF50000446760 fastq.gz 2.8 GB
EGAF50000446761 fastq.gz 2.0 GB
EGAF50000446762 fastq.gz 2.1 GB
EGAF50000446763 fastq.gz 2.3 GB
EGAF50000446764 fastq.gz 2.2 GB
EGAF50000446765 fastq.gz 2.3 GB
EGAF50000446766 fastq.gz 2.0 GB
EGAF50000446767 fastq.gz 19.3 MB
EGAF50000446768 fastq.gz 2.3 GB
EGAF50000446769 fastq.gz 2.1 GB
EGAF50000446770 fastq.gz 2.3 GB
EGAF50000446771 fastq.gz 2.1 GB
EGAF50000446772 fastq.gz 1.4 MB
EGAF50000446773 fastq.gz 2.5 GB
EGAF50000446774 fastq.gz 2.4 GB
EGAF50000446775 fastq.gz 2.3 GB
EGAF50000446776 fastq.gz 1.4 GB
EGAF50000446777 fastq.gz 3.1 GB
EGAF50000446778 fastq.gz 3.3 GB
EGAF50000446779 fastq.gz 2.2 GB
EGAF50000446780 fastq.gz 2.3 GB
EGAF50000446781 fastq.gz 62.4 MB
EGAF50000446782 fastq.gz 60.2 MB
EGAF50000446783 fastq.gz 2.4 GB
EGAF50000446784 fastq.gz 2.5 GB
EGAF50000446785 fastq.gz 2.1 GB
EGAF50000446786 fastq.gz 2.3 GB
EGAF50000446787 fastq.gz 2.1 GB
EGAF50000446788 fastq.gz 9.0 MB
EGAF50000446789 fastq.gz 2.7 GB
EGAF50000446790 fastq.gz 3.6 GB
EGAF50000446791 fastq.gz 824.1 MB
EGAF50000446792 fastq.gz 861.5 MB
EGAF50000446793 fastq.gz 641.9 MB
EGAF50000446794 fastq.gz 663.7 MB
EGAF50000446795 fastq.gz 663.1 MB
EGAF50000446796 fastq.gz 6.3 MB
EGAF50000446797 fastq.gz 91.2 MB
EGAF50000446798 fastq.gz 22.6 MB
EGAF50000446799 fastq.gz 32.3 MB
EGAF50000446800 fastq.gz 36.2 MB
EGAF50000446801 fastq.gz 977.6 MB
EGAF50000446802 fastq.gz 1.0 GB
EGAF50000446803 fastq.gz 2.6 GB
EGAF50000446804 fastq.gz 2.9 GB
EGAF50000446805 fastq.gz 2.1 GB
EGAF50000446806 fastq.gz 1.9 GB
EGAF50000446807 fastq.gz 2.2 GB
EGAF50000446808 fastq.gz 34.3 MB
EGAF50000446809 fastq.gz 2.0 GB
EGAF50000446810 fastq.gz 2.3 GB
EGAF50000446811 fastq.gz 1.9 GB
EGAF50000446812 fastq.gz 29.2 MB
EGAF50000446813 fastq.gz 1.9 GB
EGAF50000446814 fastq.gz 1.9 GB
EGAF50000446815 fastq.gz 2.2 GB
EGAF50000446816 fastq.gz 2.6 GB
EGAF50000446817 fastq.gz 2.1 GB
EGAF50000446818 fastq.gz 2.3 GB
EGAF50000446819 fastq.gz 2.4 GB
EGAF50000446820 fastq.gz 3.2 GB
EGAF50000446821 fastq.gz 3.3 GB
EGAF50000446822 fastq.gz 3.0 GB
EGAF50000446823 fastq.gz 3.1 GB
EGAF50000446824 fastq.gz 3.2 GB
EGAF50000446825 fastq.gz 2.2 GB
EGAF50000446826 fastq.gz 22.6 MB
EGAF50000446827 fastq.gz 2.5 GB
EGAF50000446828 fastq.gz 2.6 GB
EGAF50000446829 fastq.gz 2.6 GB
EGAF50000446830 fastq.gz 2.2 GB
EGAF50000446831 fastq.gz 2.2 GB
EGAF50000446832 fastq.gz 2.1 GB
EGAF50000446833 fastq.gz 109.2 MB
EGAF50000446834 fastq.gz 2.2 GB
EGAF50000446835 fastq.gz 2.6 GB
EGAF50000446836 fastq.gz 2.3 GB
EGAF50000446837 fastq.gz 2.2 GB
EGAF50000446838 fastq.gz 2.4 GB
EGAF50000446839 fastq.gz 2.9 GB
EGAF50000446840 fastq.gz 3.0 GB
EGAF50000446841 fastq.gz 2.4 GB
EGAF50000446842 fastq.gz 2.7 GB
EGAF50000446843 fastq.gz 2.6 GB
EGAF50000446844 fastq.gz 2.6 GB
EGAF50000446845 fastq.gz 2.7 GB
EGAF50000446846 fastq.gz 3.7 GB
EGAF50000446913 fastq.gz 1.8 GB
EGAF50000446914 fastq.gz 2.1 GB
EGAF50000446915 fastq.gz 2.0 GB
EGAF50000446916 fastq.gz 2.1 GB
EGAF50000446917 fastq.gz 2.2 GB
EGAF50000446918 fastq.gz 2.1 GB
EGAF50000446919 fastq.gz 2.0 GB
EGAF50000446920 fastq.gz 1.7 GB
EGAF50000446921 fastq.gz 1.8 GB
EGAF50000446941 fastq.gz 1.9 GB
EGAF50000446942 fastq.gz 2.0 GB
EGAF50000446943 fastq.gz 2.1 GB
EGAF50000446944 fastq.gz 1.8 GB
EGAF50000446945 fastq.gz 1.9 GB
EGAF50000446946 fastq.gz 1.3 GB
EGAF50000446947 fastq.gz 1.4 GB
EGAF50000446948 fastq.gz 2.0 GB
EGAF50000446949 fastq.gz 1.9 GB
EGAF50000446950 fastq.gz 2.0 GB
EGAF50000446951 fastq.gz 2.1 GB
EGAF50000446952 fastq.gz 2.0 GB
EGAF50000446953 fastq.gz 1.9 GB
EGAF50000446954 fastq.gz 2.0 GB
EGAF50000446955 fastq.gz 2.0 GB
EGAF50000446956 fastq.gz 1.9 GB
EGAF50000446957 fastq.gz 818.0 MB
EGAF50000446958 fastq.gz 860.7 MB
EGAF50000446959 fastq.gz 900.6 MB
160 Files (271.5 GB)