snRNA-seq
This dataset contains raw sequencing and processed data of single nuclei transcriptomes. The data were generated with 10x Chromium probe-based single-nucleus assay on FFPE tissues of 63 ST-EPN tumour resections. Raw data contain BAM (and BAM.BAI) files of the sequencing. Processed data contain aligned .h5 counts matrices as generated by 10x CellRanger for raw and filtered running options.
- 13/10/2025
- 63 samples
- DAC: EGAC50000000765
- Technology: Illumina NovaSeq 6000
DUO:0000006 version: 2021-02-23
health or medical or biomedical research
This data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.
DUO:0000018 version: 2021-02-23
not for profit, non commercial use only
This data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.
Access policy for study ST-EPN heterogeneity
Access to this dataset is controlled and will be considered upon request. Data may be used for non-commercial research purposes only. Redistribution of the data is prohibited.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000001318 | Cancer Genomics |
- Changed title of the respective study.
- Dataset Released
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
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|---|---|---|---|---|
| EGAF50000450730 | bam | 6.4 GB |
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| EGAF50000450731 | h5 | 5.9 MB |
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| EGAF50000450732 | bai | 2.2 MB |
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| EGAF50000450733 | h5 | 20.0 MB |
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| EGAF50000450734 | bai | 2.1 MB |
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| EGAF50000450735 | h5 | 2.4 MB |
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| EGAF50000450736 | h5 | 10.8 MB |
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| EGAF50000450737 | bam | 6.3 GB |
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| EGAF50000450738 | bam | 2.1 GB |
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| EGAF50000450739 | bai | 2.2 MB |
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| EGAF50000450740 | h5 | 8.7 MB |
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| EGAF50000450741 | h5 | 22.4 MB |
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| EGAF50000450742 | bai | 2.2 MB |
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| EGAF50000450743 | h5 | 13.3 MB |
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| EGAF50000450744 | h5 | 40.5 MB |
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| EGAF50000450745 | bam | 8.5 GB |
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| EGAF50000450746 | bai | 2.1 MB |
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| EGAF50000450747 | h5 | 2.3 MB |
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| EGAF50000450748 | h5 | 8.1 MB |
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| EGAF50000450749 | bai | 2.1 MB |
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| EGAF50000450750 | h5 | 2.1 MB |
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| EGAF50000450751 | h5 | 6.8 MB |
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| EGAF50000450752 | bam | 4.2 GB |
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| EGAF50000450753 | bam | 1.1 GB |
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| EGAF50000450754 | bam | 580.7 MB |
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| EGAF50000450755 | bai | 2.2 MB |
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| EGAF50000450756 | h5 | 6.0 MB |
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| EGAF50000450757 | h5 | 18.1 MB |
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| EGAF50000450758 | bai | 2.1 MB |
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| EGAF50000450759 | h5 | 3.7 MB |
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| EGAF50000450760 | h5 | 13.6 MB |
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| EGAF50000450761 | bam | 2.3 GB |
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| EGAF50000450762 | bam | 569.0 MB |
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| EGAF50000450763 | h5 | 1.1 MB |
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| EGAF50000450764 | bai | 2.1 MB |
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| EGAF50000450765 | h5 | 4.3 MB |
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| EGAF50000450766 | bai | 2.1 MB |
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| EGAF50000450767 | h5 | 2.2 MB |
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| EGAF50000450768 | h5 | 7.6 MB |
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| EGAF50000450769 | bam | 954.4 MB |
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| EGAF50000450770 | bam | 1.2 GB |
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| EGAF50000450771 | bai | 2.0 MB |
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| EGAF50000450772 | h5 | 945.0 kB |
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| EGAF50000450773 | h5 | 26.2 MB |
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| EGAF50000450774 | h5 | 3.2 MB |
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| EGAF50000450775 | bam | 392.5 MB |
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| EGAF50000450776 | bam | 744.3 MB |
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| EGAF50000450777 | bai | 2.1 MB |
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| EGAF50000450778 | h5 | 1.2 MB |
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| EGAF50000450779 | h5 | 4.8 MB |
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| EGAF50000450780 | bai | 2.1 MB |
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| EGAF50000450781 | h5 | 2.1 MB |
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| EGAF50000450782 | bam | 1.8 GB |
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| EGAF50000450783 | h5 | 10.3 MB |
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| EGAF50000450784 | bai | 2.2 MB |
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| EGAF50000450785 | h5 | 19.2 MB |
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| EGAF50000450786 | h5 | 32.0 MB |
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| EGAF50000450787 | bam | 2.1 GB |
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| EGAF50000450788 | bai | 2.1 MB |
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| EGAF50000450789 | h5 | 7.6 MB |
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| EGAF50000450790 | h5 | 14.5 MB |
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| EGAF50000450791 | bai | 2.0 MB |
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| EGAF50000450792 | h5 | 6.8 MB |
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| EGAF50000450793 | h5 | 11.5 MB |
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| EGAF50000450794 | bam | 1.6 GB |
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| EGAF50000450795 | bai | 2.0 MB |
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| EGAF50000450796 | h5 | 5.1 MB |
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| EGAF50000450797 | h5 | 9.9 MB |
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| EGAF50000450798 | bam | 1.1 GB |
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| EGAF50000450799 | bai | 2.0 MB |
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| EGAF50000450800 | h5 | 5.7 MB |
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| EGAF50000450801 | h5 | 11.0 MB |
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| EGAF50000450802 | bam | 1.3 GB |
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| EGAF50000450803 | bai | 2.0 MB |
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| EGAF50000450804 | h5 | 6.0 MB |
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| EGAF50000450805 | h5 | 12.4 MB |
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| EGAF50000450806 | bam | 666.8 MB |
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| EGAF50000450807 | bam | 1.9 GB |
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| EGAF50000450808 | bai | 2.0 MB |
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| EGAF50000450809 | h5 | 4.3 MB |
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| EGAF50000450810 | h5 | 6.3 MB |
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| EGAF50000450811 | bai | 2.2 MB |
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| EGAF50000450812 | h5 | 13.4 MB |
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| EGAF50000450813 | h5 | 22.1 MB |
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| EGAF50000450814 | bam | 6.2 GB |
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| EGAF50000450815 | bam | 4.9 GB |
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| EGAF50000450816 | bai | 2.1 MB |
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| EGAF50000450817 | h5 | 14.3 MB |
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| EGAF50000450818 | h5 | 24.4 MB |
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| EGAF50000450819 | bam | 5.3 GB |
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| EGAF50000450820 | bai | 2.1 MB |
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| EGAF50000450821 | h5 | 1.6 MB |
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| EGAF50000450822 | h5 | 6.9 MB |
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| EGAF50000450823 | bam | 1.2 GB |
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| EGAF50000450824 | bai | 2.2 MB |
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| EGAF50000450825 | h5 | 18.3 MB |
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| EGAF50000450826 | h5 | 37.8 MB |
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| EGAF50000450827 | bam | 2.4 GB |
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| EGAF50000450828 | bai | 2.1 MB |
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| EGAF50000450829 | h5 | 3.7 MB |
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| EGAF50000450830 | h5 | 11.3 MB |
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| EGAF50000450831 | bam | 4.6 GB |
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| EGAF50000450832 | bai | 2.2 MB |
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| EGAF50000450833 | h5 | 7.0 MB |
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| EGAF50000450834 | h5 | 18.7 MB |
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| EGAF50000450835 | bam | 1.4 GB |
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| EGAF50000450836 | bai | 2.1 MB |
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| EGAF50000450837 | h5 | 1.8 MB |
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| EGAF50000450838 | h5 | 8.1 MB |
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| EGAF50000450839 | bam | 9.9 GB |
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| EGAF50000450840 | bai | 2.2 MB |
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| EGAF50000450841 | h5 | 6.3 MB |
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| EGAF50000450842 | h5 | 19.2 MB |
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| EGAF50000450843 | bam | 2.4 GB |
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| EGAF50000450844 | bai | 2.1 MB |
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| EGAF50000450845 | h5 | 4.0 MB |
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| EGAF50000450846 | h5 | 11.9 MB |
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| EGAF50000450847 | bam | 4.3 GB |
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| EGAF50000450848 | bai | 2.1 MB |
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| EGAF50000450849 | h5 | 5.3 MB |
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| EGAF50000450850 | h5 | 15.1 MB |
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| EGAF50000450851 | bam | 3.5 GB |
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| EGAF50000450852 | bai | 2.2 MB |
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| EGAF50000450853 | h5 | 7.0 MB |
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| EGAF50000450854 | h5 | 18.8 MB |
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| EGAF50000450855 | bam | 4.2 GB |
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| EGAF50000450856 | bai | 2.2 MB |
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| EGAF50000450857 | h5 | 12.7 MB |
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| EGAF50000450858 | h5 | 28.6 MB |
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| EGAF50000450859 | bam | 3.2 GB |
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| EGAF50000450860 | bai | 2.1 MB |
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| EGAF50000450861 | h5 | 8.4 MB |
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| EGAF50000450862 | h5 | 19.7 MB |
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| EGAF50000450863 | bam | 7.4 GB |
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| EGAF50000450864 | bai | 2.1 MB |
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| EGAF50000450865 | h5 | 2.9 MB |
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| EGAF50000450866 | h5 | 13.1 MB |
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| EGAF50000450867 | bam | 4.0 GB |
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| EGAF50000450868 | bai | 2.2 MB |
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| EGAF50000450869 | h5 | 6.3 MB |
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| EGAF50000450870 | h5 | 24.7 MB |
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| EGAF50000450871 | bam | 4.9 GB |
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| EGAF50000450872 | bai | 2.1 MB |
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| EGAF50000450873 | h5 | 3.8 MB |
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| EGAF50000450874 | h5 | 14.5 MB |
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| EGAF50000450875 | bam | 9.3 GB |
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| EGAF50000450876 | bai | 2.2 MB |
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| EGAF50000450877 | h5 | 7.7 MB |
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| EGAF50000450878 | h5 | 20.2 MB |
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| EGAF50000450879 | bam | 3.3 GB |
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| EGAF50000450880 | bai | 2.1 MB |
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| EGAF50000450881 | h5 | 5.9 MB |
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| EGAF50000450882 | h5 | 11.0 MB |
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| EGAF50000450883 | bam | 6.9 GB |
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| EGAF50000450884 | bai | 2.1 MB |
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| EGAF50000450885 | h5 | 5.5 MB |
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| EGAF50000450886 | h5 | 13.6 MB |
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| EGAF50000450887 | bam | 1.4 GB |
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| EGAF50000450888 | bai | 2.0 MB |
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| EGAF50000450889 | h5 | 3.2 MB |
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| EGAF50000450890 | h5 | 5.8 MB |
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| EGAF50000450891 | bam | 4.3 GB |
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| EGAF50000450892 | bai | 2.1 MB |
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| EGAF50000450893 | h5 | 1.8 MB |
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| EGAF50000450894 | h5 | 7.9 MB |
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| EGAF50000450895 | bam | 2.0 GB |
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| EGAF50000450896 | bai | 2.0 MB |
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| EGAF50000450897 | h5 | 1.2 MB |
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| EGAF50000450898 | h5 | 5.0 MB |
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| EGAF50000450899 | bai | 2.2 MB |
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| EGAF50000450900 | h5 | 10.1 MB |
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| EGAF50000450901 | h5 | 18.3 MB |
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| EGAF50000450902 | bam | 1.2 GB |
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| EGAF50000450903 | bai | 2.2 MB |
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| EGAF50000450904 | h5 | 5.3 MB |
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| EGAF50000450905 | h5 | 16.1 MB |
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| EGAF50000450906 | bam | 5.3 GB |
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| EGAF50000450907 | bam | 1.2 GB |
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| EGAF50000450908 | bai | 2.1 MB |
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| EGAF50000450909 | h5 | 8.4 MB |
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| EGAF50000450910 | h5 | 16.5 MB |
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| EGAF50000450911 | bam | 6.9 GB |
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| EGAF50000450912 | bai | 2.0 MB |
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| EGAF50000450913 | h5 | 1.1 MB |
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| EGAF50000450914 | bam | 950.8 MB |
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| EGAF50000450915 | bai | 2.0 MB |
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| EGAF50000450916 | bai | 2.2 MB |
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| EGAF50000450917 | h5 | 11.5 MB |
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| EGAF50000450918 | h5 | 30.1 MB |
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| EGAF50000450919 | bam | 6.7 GB |
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| EGAF50000450920 | bai | 2.2 MB |
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| EGAF50000450921 | h5 | 8.9 MB |
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| EGAF50000450922 | h5 | 33.3 MB |
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| EGAF50000450923 | h5 | 2.3 MB |
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| EGAF50000450924 | h5 | 7.0 MB |
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| EGAF50000450925 | bam | 1.1 GB |
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| EGAF50000450926 | bai | 2.1 MB |
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| EGAF50000450927 | h5 | 2.0 MB |
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| EGAF50000450928 | h5 | 7.3 MB |
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| EGAF50000450929 | bam | 7.7 GB |
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| EGAF50000450930 | bai | 2.2 MB |
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| EGAF50000450931 | h5 | 7.3 MB |
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| EGAF50000450932 | bam | 756.0 MB |
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| EGAF50000450933 | bai | 2.0 MB |
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| EGAF50000450934 | h5 | 1.5 MB |
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| EGAF50000450935 | h5 | 4.8 MB |
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| EGAF50000450936 | bam | 792.0 MB |
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| EGAF50000450937 | bai | 2.1 MB |
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| EGAF50000450938 | h5 | 2.6 MB |
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| EGAF50000450939 | h5 | 6.0 MB |
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| EGAF50000450940 | bam | 6.2 GB |
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| EGAF50000450941 | bai | 2.1 MB |
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| EGAF50000450942 | h5 | 7.1 MB |
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| EGAF50000450943 | h5 | 16.1 MB |
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| EGAF50000450944 | bam | 1.7 GB |
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| EGAF50000450945 | bai | 2.1 MB |
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| EGAF50000450946 | h5 | 4.5 MB |
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| EGAF50000450947 | h5 | 9.8 MB |
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| EGAF50000450948 | bam | 2.7 GB |
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| EGAF50000450949 | bai | 2.1 MB |
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| EGAF50000450950 | h5 | 3.2 MB |
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| EGAF50000450951 | h5 | 11.1 MB |
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| EGAF50000450952 | bam | 1.1 GB |
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| EGAF50000450953 | bai | 2.0 MB |
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| EGAF50000450954 | h5 | 2.6 MB |
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| EGAF50000450955 | h5 | 7.6 MB |
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| EGAF50000450956 | bam | 2.0 GB |
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| EGAF50000450957 | bai | 2.1 MB |
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| EGAF50000450958 | h5 | 7.7 MB |
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| EGAF50000450959 | h5 | 19.6 MB |
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| EGAF50000450960 | bam | 2.6 GB |
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| EGAF50000450961 | bai | 2.1 MB |
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| EGAF50000450962 | h5 | 5.0 MB |
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| EGAF50000450963 | h5 | 15.3 MB |
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| EGAF50000450964 | bam | 4.5 GB |
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| EGAF50000450965 | bai | 2.1 MB |
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| EGAF50000450966 | h5 | 4.4 MB |
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| EGAF50000450967 | h5 | 13.6 MB |
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| EGAF50000450968 | bam | 2.4 GB |
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| EGAF50000450969 | bai | 2.1 MB |
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| EGAF50000450970 | h5 | 3.6 MB |
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| EGAF50000450971 | h5 | 9.8 MB |
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| EGAF50000450972 | bam | 1.6 GB |
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| EGAF50000450973 | bai | 2.2 MB |
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| EGAF50000450974 | h5 | 14.1 MB |
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| EGAF50000450975 | h5 | 29.3 MB |
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| EGAF50000450976 | bam | 5.6 GB |
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| EGAF50000451307 | h5 | 6.8 MB |
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| EGAF50000451308 | bai | 2.1 MB |
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| EGAF50000451309 | h5 | 2.2 MB |
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| EGAF50000451310 | h5 | 13.1 MB |
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| EGAF50000451311 | bam | 2.2 GB |
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| 252 Files (209.6 GB) | ||||