About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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ovarian cancer sample exome seq

Tissue samples were collected from 18 ovarian cancer patients. After mechanical and enzymatic dissociation, a part of these tissues underwent growth factoromics analysis. For four cases, single-cell sequencing analysis was conducted under conditions with or without estradiol. Additionally, the remains of the tissues were frozen and subsequently subjected to exome sequencing on 16 of these samples. Sixteen cases were diagnosed as HGSOC, while two samples were clear cell or mucinous type (Extended Data Table 1). All cases were grade 3, and none had received neoadjuvant chemotherapy.

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DUO:0000018
version: 2021-02-23

not for profit, non commercial use only

This data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.

DUO:0000042
version: 2021-02-23

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

ovarian cancer patient NGS policy

Data Access Agreement of NGS data of epithelial ovarian cancer (EOC) experiment

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000422 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000499945 fastq.gz 2.0 GB
EGAF50000499946 fastq.gz 2.0 GB
EGAF50000499947 fastq.gz 4.0 GB
EGAF50000499948 fastq.gz 4.1 GB
EGAF50000499949 fastq.gz 1.9 GB
EGAF50000499950 fastq.gz 2.0 GB
EGAF50000499951 fastq.gz 3.9 GB
EGAF50000499952 fastq.gz 2.2 GB
EGAF50000499953 fastq.gz 4.0 GB
EGAF50000499954 fastq.gz 2.3 GB
EGAF50000499955 fastq.gz 4.7 GB
EGAF50000499956 fastq.gz 4.6 GB
EGAF50000499957 fastq.gz 2.2 GB
EGAF50000499958 fastq.gz 2.3 GB
EGAF50000499959 fastq.gz 4.1 GB
EGAF50000499960 fastq.gz 2.2 GB
EGAF50000499961 fastq.gz 2.3 GB
EGAF50000499962 fastq.gz 4.1 GB
EGAF50000499963 fastq.gz 4.3 GB
EGAF50000499964 fastq.gz 4.2 GB
EGAF50000499965 fastq.gz 2.9 GB
EGAF50000499966 fastq.gz 2.8 GB
EGAF50000499967 fastq.gz 4.5 GB
EGAF50000499968 fastq.gz 2.3 GB
EGAF50000499969 fastq.gz 2.4 GB
EGAF50000499970 fastq.gz 4.7 GB
EGAF50000499971 fastq.gz 4.5 GB
EGAF50000499972 fastq.gz 2.4 GB
EGAF50000499973 fastq.gz 2.4 GB
EGAF50000499974 fastq.gz 4.6 GB
EGAF50000499975 fastq.gz 4.2 GB
EGAF50000499976 fastq.gz 4.3 GB
EGAF50000500007 fastq.gz 9.3 GB
EGAF50000500008 fastq.gz 3.7 GB
EGAF50000500009 fastq.gz 8.5 GB
EGAF50000500010 fastq.gz 8.6 GB
EGAF50000500011 fastq.gz 9.6 GB
EGAF50000500012 fastq.gz 10.0 GB
EGAF50000500013 fastq.gz 9.6 GB
EGAF50000500014 fastq.gz 9.7 GB
EGAF50000500015 fastq.gz 11.6 GB
EGAF50000500016 fastq.gz 9.9 GB
EGAF50000500017 fastq.gz 10.1 GB
EGAF50000500018 fastq.gz 10.0 GB
EGAF50000500048 fastq.gz 9.5 GB
EGAF50000500049 fastq.gz 9.4 GB
EGAF50000500050 fastq.gz 10.9 GB
EGAF50000500051 fastq.gz 10.7 GB
48 Files (256.5 GB)