WGS data of paediatric B-other B cell acute lymphoblastic leukemia (set2)
The dataset includes FASTQ and BAM files from diagnostic and matched remission (control) samples of four B-other ALL patients (ALLT-321, ALLT-311, ALLT-314, ALLT-319). Sequencing library was made using PCR free-based WGS library preparation (PCR-), using TruSeq DNA PCRfree library preparation kit v1. Both diagnostic (60x) and remission (30x) samples were sequenced using HiSeq X.
- 09/01/2026
- 8 samples
- DAC: EGAC00001001551
- Technology: Illumina HiSeq X
Two PIs (Tampere/Kuopio) and a legal representative of the Tampere University Hospital
Data will be shared if the proposed project falls within the patient/caretaker consent
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000001497 | Whole Genome Sequencing |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
i
|
|---|---|---|---|---|
| EGAF50000512452 | fastq.gz | 77.4 GB |
|
|
| EGAF50000512453 | fastq.gz | 72.4 GB |
|
|
| EGAF50000512454 | fastq.gz | 76.2 GB |
|
|
| EGAF50000512455 | fastq.gz | 71.8 GB |
|
|
| EGAF50000512456 | fastq.gz | 72.2 GB |
|
|
| EGAF50000512457 | fastq.gz | 75.0 GB |
|
|
| EGAF50000512458 | fastq.gz | 34.5 GB |
|
|
| EGAF50000512459 | fastq.gz | 39.6 GB |
|
|
| EGAF50000512460 | fastq.gz | 75.9 GB |
|
|
| EGAF50000512461 | fastq.gz | 37.3 GB |
|
|
| EGAF50000512462 | fastq.gz | 36.2 GB |
|
|
| EGAF50000512463 | fastq.gz | 70.2 GB |
|
|
| EGAF50000512473 | fastq.gz | 34.8 GB |
|
|
| EGAF50000512478 | fastq.gz | 35.3 GB |
|
|
| EGAF50000512486 | fastq.gz | 37.8 GB |
|
|
| EGAF50000512491 | fastq.gz | 38.3 GB |
|
|
| EGAF50000512742 | bam | 66.5 GB |
|
|
| EGAF50000512743 | bam | 138.2 GB |
|
|
| EGAF50000512744 | bam | 66.6 GB |
|
|
| EGAF50000512745 | bam | 69.9 GB |
|
|
| EGAF50000512748 | bam | 130.4 GB |
|
|
| EGAF50000512749 | bam | 139.8 GB |
|
|
| EGAF50000512752 | bam | 132.8 GB |
|
|
| EGAF50000512763 | bai | 9.5 MB |
|
|
| EGAF50000512764 | bai | 9.3 MB |
|
|
| EGAF50000512765 | bai | 9.5 MB |
|
|
| EGAF50000512766 | bai | 9.4 MB |
|
|
| EGAF50000512767 | bai | 9.6 MB |
|
|
| EGAF50000512768 | bai | 9.4 MB |
|
|
| EGAF50000512769 | bai | 9.5 MB |
|
|
| EGAF50000512804 | bai | 9.4 MB |
|
|
| EGAF50000512805 | bam | 69.3 GB |
|
|
| 32 Files (1.7 TB) | ||||