WGS data of paediatric B-other B cell acute lymphoblastic leukemia (set5)
The dataset includes FASTQ and BAM/CRAM files from diagnostic and matched remission (control) samples of two B-other ALL patients (ALLT-396, ALLK-131). Sequencing library was made using PCR free-based WGS library preparation (PCR-), using Novogene NGS DNA Library Prep Set. Both diagnostic (90x) and remission (30x) samples were sequenced using NovaSeqX Plus.
- 09/01/2026
- 4 samples
- DAC: EGAC00001001551
- Technology: Illumina NovaSeq X Plus
Two PIs (Tampere/Kuopio) and a legal representative of the Tampere University Hospital
Data will be shared if the proposed project falls within the patient/caretaker consent
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000001497 | Whole Genome Sequencing |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
i
|
|---|---|---|---|---|
| EGAF50000512676 | fq.gz | 21.6 GB |
|
|
| EGAF50000512677 | fq.gz | 21.6 GB |
|
|
| EGAF50000512678 | fq.gz | 10.9 GB |
|
|
| EGAF50000512679 | fq.gz | 11.2 GB |
|
|
| EGAF50000512680 | fq.gz | 12.8 GB |
|
|
| EGAF50000512681 | fq.gz | 13.0 GB |
|
|
| EGAF50000512682 | fq.gz | 9.8 GB |
|
|
| EGAF50000512683 | fq.gz | 10.0 GB |
|
|
| EGAF50000512684 | fq.gz | 4.3 GB |
|
|
| EGAF50000512685 | fq.gz | 4.4 GB |
|
|
| EGAF50000512686 | fq.gz | 15.4 GB |
|
|
| EGAF50000512687 | fq.gz | 15.8 GB |
|
|
| EGAF50000512688 | fq.gz | 4.4 GB |
|
|
| EGAF50000512689 | fq.gz | 4.4 GB |
|
|
| EGAF50000512714 | fq.gz | 12.7 GB |
|
|
| EGAF50000512715 | fq.gz | 12.7 GB |
|
|
| EGAF50000512718 | fq.gz | 10.2 GB |
|
|
| EGAF50000512719 | fq.gz | 10.0 GB |
|
|
| EGAF50000512721 | fq.gz | 9.5 GB |
|
|
| EGAF50000512726 | fq.gz | 9.4 GB |
|
|
| EGAF50000512727 | fq.gz | 9.4 GB |
|
|
| EGAF50000512728 | fq.gz | 9.3 GB |
|
|
| EGAF50000512730 | fq.gz | 10.5 GB |
|
|
| EGAF50000512731 | fq.gz | 10.4 GB |
|
|
| EGAF50000512732 | fq.gz | 9.7 GB |
|
|
| EGAF50000512733 | fq.gz | 9.7 GB |
|
|
| EGAF50000512736 | cram | 6.7 GB |
|
|
| EGAF50000512737 | cram | 6.4 GB |
|
|
| EGAF50000512739 | cram | 20.2 GB |
|
|
| EGAF50000512740 | cram | 16.3 GB |
|
|
| EGAF50000512796 | crai | 700.7 kB |
|
|
| EGAF50000512797 | crai | 2.2 MB |
|
|
| EGAF50000512800 | crai | 773.3 kB |
|
|
| EGAF50000512801 | crai | 1.5 MB |
|
|
| 34 Files (332.5 GB) | ||||