About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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T-ALL RNA-Seq raw data files for ALLCatchR2

The data set consists of unprocessed RNA-Seq data from 71 patients diagnosed with T cell acute lymphoblastic leukemia in fastq file format. Samples from bone marrow or peripheral blood were subjected to mRNA library prep using Poly-A selection and sequencing on a NovaSeq 6000 system yielding approximately 30 million reads per sample.

Request Access

Data will be made available for well defined research-purposes in a form which does not allow re-identification of individuals. Recipients are required to adhere to the Data Transfer Agreement.

Data will be made available for well defined research-purposes in a form which does not allow re-identification of individuals. Recipients are required to adhere to the Data Transfer Agreement.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001829 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00009042315 fastq.gz 1.5 GB
EGAF00009042316 fastq.gz 1.5 GB
EGAF00009042317 fastq.gz 1.5 GB
EGAF00009042318 fastq.gz 1.6 GB
EGAF00009042319 fastq.gz 2.8 GB
EGAF00009042320 fastq.gz 2.9 GB
EGAF00009042321 fastq.gz 2.1 GB
EGAF00009042322 fastq.gz 1.8 GB
EGAF00009042323 fastq.gz 1.8 GB
EGAF00009042324 fastq.gz 1.9 GB
EGAF00009042325 fastq.gz 1.4 GB
EGAF00009042326 fastq.gz 1.9 GB
EGAF00009042327 fastq.gz 1.3 GB
EGAF00009042328 fastq.gz 1.9 GB
EGAF00009042329 fastq.gz 2.0 GB
EGAF00009042330 fastq.gz 2.1 GB
EGAF00009042331 fastq.gz 1.3 GB
EGAF00009042332 fastq.gz 1.5 GB
EGAF00009042333 fastq.gz 2.2 GB
EGAF00009042334 fastq.gz 1.8 GB
EGAF00009042335 fastq.gz 2.1 GB
EGAF00009042336 fastq.gz 1.8 GB
EGAF00009042337 fastq.gz 2.0 GB
EGAF00009042338 fastq.gz 2.1 GB
EGAF00009042339 fastq.gz 2.1 GB
EGAF00009042340 fastq.gz 3.8 GB
EGAF00009042341 fastq.gz 2.0 GB
EGAF00009042342 fastq.gz 1.7 GB
EGAF00009042343 fastq.gz 2.1 GB
EGAF00009042344 fastq.gz 1.3 GB
EGAF00009042345 fastq.gz 1.3 GB
EGAF00009042346 fastq.gz 1.6 GB
EGAF00009042347 fastq.gz 2.1 GB
EGAF00009042348 fastq.gz 1.9 GB
EGAF00009042349 fastq.gz 2.2 GB
EGAF00009042350 fastq.gz 2.0 GB
EGAF00009042351 fastq.gz 2.1 GB
EGAF00009042352 fastq.gz 1.7 GB
EGAF00009042353 fastq.gz 3.7 GB
EGAF00009042354 fastq.gz 1.7 GB
EGAF00009042355 fastq.gz 3.6 GB
EGAF00009042356 fastq.gz 1.9 GB
EGAF00009042357 fastq.gz 2.1 GB
EGAF00009042358 fastq.gz 2.9 GB
EGAF00009042359 fastq.gz 2.2 GB
EGAF00009042360 fastq.gz 1.9 GB
EGAF00009042361 fastq.gz 1.9 GB
EGAF00009042362 fastq.gz 1.7 GB
EGAF00009042363 fastq.gz 2.5 GB
EGAF00009042364 fastq.gz 1.8 GB
EGAF00009042365 fastq.gz 2.7 GB
EGAF00009042366 fastq.gz 1.5 GB
EGAF00009042367 fastq.gz 838.3 MB
EGAF00009042368 fastq.gz 3.1 GB
EGAF00009042369 fastq.gz 1.8 GB
EGAF00009042370 fastq.gz 1.7 GB
EGAF00009042371 fastq.gz 2.7 GB
EGAF00009042372 fastq.gz 2.5 GB
EGAF00009042373 fastq.gz 2.0 GB
EGAF00009042374 fastq.gz 3.8 GB
EGAF00009042375 fastq.gz 1.6 GB
EGAF00009042376 fastq.gz 1.6 GB
EGAF00009042377 fastq.gz 884.8 MB
EGAF00009042378 fastq.gz 2.6 GB
EGAF00009042379 fastq.gz 1.9 GB
EGAF00009042380 fastq.gz 1.9 GB
EGAF00009042381 fastq.gz 1.7 GB
EGAF00009042382 fastq.gz 2.3 GB
EGAF00009042383 fastq.gz 1.8 GB
EGAF00009042384 fastq.gz 2.8 GB
EGAF00009042385 fastq.gz 3.0 GB
EGAF00009042386 fastq.gz 2.2 GB
EGAF00009042387 fastq.gz 2.1 GB
EGAF00009042388 fastq.gz 3.7 GB
EGAF00009042389 fastq.gz 2.5 GB
EGAF00009042390 fastq.gz 1.9 GB
EGAF00009042391 fastq.gz 2.9 GB
EGAF00009042392 fastq.gz 2.9 GB
EGAF00009042393 fastq.gz 2.6 GB
EGAF00009042394 fastq.gz 3.4 GB
EGAF00009042395 fastq.gz 3.8 GB
EGAF00009042396 fastq.gz 3.0 GB
EGAF00009042397 fastq.gz 3.0 GB
EGAF00009042398 fastq.gz 2.8 GB
EGAF00009042399 fastq.gz 1.9 GB
EGAF00009042400 fastq.gz 1.6 GB
EGAF00009042401 fastq.gz 2.9 GB
EGAF00009042402 fastq.gz 4.7 GB
EGAF00009042403 fastq.gz 4.5 GB
EGAF00009042404 fastq.gz 1.8 GB
EGAF00009042405 fastq.gz 2.6 GB
EGAF00009042406 fastq.gz 2.8 GB
EGAF00009042407 fastq.gz 2.8 GB
EGAF00009042408 fastq.gz 2.3 GB
EGAF00009042409 fastq.gz 2.9 GB
EGAF00009042410 fastq.gz 2.8 GB
EGAF00009042411 fastq.gz 1.7 GB
EGAF00009042412 fastq.gz 2.6 GB
EGAF00009042413 fastq.gz 3.5 GB
EGAF00009042414 fastq.gz 4.4 GB
EGAF00009042415 fastq.gz 2.1 GB
EGAF00009042416 fastq.gz 2.9 GB
EGAF00009042417 fastq.gz 3.5 GB
EGAF00009042418 fastq.gz 2.9 GB
EGAF00009042419 fastq.gz 1.7 GB
EGAF00009042420 fastq.gz 4.3 GB
EGAF00009042421 fastq.gz 1.7 GB
EGAF00009042422 fastq.gz 4.1 GB
EGAF00009042423 fastq.gz 1.8 GB
EGAF00009042424 fastq.gz 1.9 GB
EGAF00009042425 fastq.gz 3.4 GB
EGAF00009042426 fastq.gz 2.9 GB
EGAF00009042427 fastq.gz 2.8 GB
EGAF00009042428 fastq.gz 2.8 GB
EGAF00009042429 fastq.gz 3.8 GB
EGAF00009042430 fastq.gz 3.8 GB
EGAF00009042431 fastq.gz 2.0 GB
EGAF00009042432 fastq.gz 3.4 GB
EGAF00009042433 fastq.gz 2.8 GB
EGAF00009042434 fastq.gz 3.4 GB
EGAF00009042435 fastq.gz 10.4 GB
EGAF00009042436 fastq.gz 3.5 GB
EGAF00009042437 fastq.gz 2.1 GB
EGAF00009042438 fastq.gz 4.0 GB
EGAF00009042439 fastq.gz 4.2 GB
EGAF00009042440 fastq.gz 3.1 GB
EGAF00009042441 fastq.gz 2.3 GB
EGAF00009042442 fastq.gz 2.8 GB
EGAF00009042443 fastq.gz 11.3 GB
EGAF00009042444 fastq.gz 1.7 GB
EGAF00009042445 fastq.gz 2.0 GB
EGAF00009042446 fastq.gz 3.0 GB
EGAF00009042447 fastq.gz 1.7 GB
EGAF00009042448 fastq.gz 4.7 GB
EGAF00009042449 fastq.gz 3.1 GB
EGAF00009042450 fastq.gz 2.9 GB
EGAF00009042451 fastq.gz 1.7 GB
EGAF00009042452 fastq.gz 4.1 GB
EGAF00009042453 fastq.gz 3.1 GB
EGAF00009042454 fastq.gz 3.5 GB
EGAF00009042455 fastq.gz 4.1 GB
EGAF00009042456 fastq.gz 3.6 GB
142 Files (369.6 GB)