About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Bulk RNA-Seq from RPE cells

RPE cell lines were transfected with a GFP empty vector as a control, QARS wild-type (wt), and a catalytically inactive QARS mutant. To investigate the impact of QARS in its active versus inactive form on DNA damage repair factors, three treatment conditions were applied: (1) untreated, (2) pulse, where the DNA-damaging drug was administered for 1 hour, and (3) a washout condition, where the drug was applied for 1 hour and then removed, followed by a 5-hour recovery period to allow for DNA repair assessment.

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Data Access policy

Access to the sequence level data produced by the «U830 Stress and Cancer» laboratory at the Institut Curie is controlled by Fatima Mechta-Grigoriou, Principal Investigator (DAC). Access to data will be granted to qualified investigators for appropriate use after request to Fatima.Mechta-Grigoriou@curie.fr

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001968 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000924584 fastq.gz 2.2 GB
EGAF50000924585 fastq.gz 2.2 GB
EGAF50000924586 fastq.gz 2.6 GB
EGAF50000924587 fastq.gz 2.4 GB
EGAF50000924588 fastq.gz 2.3 GB
EGAF50000924589 fastq.gz 2.2 GB
EGAF50000924590 fastq.gz 3.8 GB
EGAF50000924591 fastq.gz 2.4 GB
EGAF50000924592 fastq.gz 2.2 GB
EGAF50000924593 fastq.gz 2.3 GB
EGAF50000924594 fastq.gz 2.5 GB
EGAF50000924595 fastq.gz 2.4 GB
EGAF50000924596 fastq.gz 2.4 GB
EGAF50000924597 fastq.gz 2.1 GB
EGAF50000924598 fastq.gz 3.2 GB
EGAF50000924599 fastq.gz 2.9 GB
EGAF50000924600 fastq.gz 2.8 GB
EGAF50000924601 fastq.gz 2.7 GB
EGAF50000924602 fastq.gz 2.1 GB
EGAF50000924603 fastq.gz 2.9 GB
EGAF50000924604 fastq.gz 2.9 GB
EGAF50000924605 fastq.gz 2.1 GB
EGAF50000924606 fastq.gz 2.5 GB
EGAF50000924607 fastq.gz 2.5 GB
EGAF50000924608 fastq.gz 3.2 GB
EGAF50000924609 fastq.gz 2.7 GB
EGAF50000924610 fastq.gz 2.8 GB
EGAF50000924611 fastq.gz 2.8 GB
EGAF50000924612 fastq.gz 2.8 GB
EGAF50000924613 fastq.gz 2.8 GB
EGAF50000924614 fastq.gz 3.8 GB
EGAF50000924615 fastq.gz 2.4 GB
EGAF50000924672 fastq.gz 2.7 GB
EGAF50000924673 fastq.gz 2.8 GB
EGAF50000924674 fastq.gz 2.8 GB
EGAF50000924675 fastq.gz 2.2 GB
EGAF50000924676 fastq.gz 2.9 GB
EGAF50000924677 fastq.gz 2.9 GB
EGAF50000924678 fastq.gz 2.1 GB
EGAF50000924679 fastq.gz 2.8 GB
EGAF50000924680 fastq.gz 2.2 GB
EGAF50000924681 fastq.gz 3.1 GB
EGAF50000924682 fastq.gz 3.2 GB
EGAF50000924683 fastq.gz 2.4 GB
EGAF50000924684 fastq.gz 2.6 GB
EGAF50000924685 fastq.gz 2.6 GB
EGAF50000924686 fastq.gz 2.6 GB
EGAF50000924687 fastq.gz 2.3 GB
EGAF50000924688 fastq.gz 2.7 GB
EGAF50000924689 fastq.gz 2.8 GB
50 Files (131.8 GB)