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As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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CLUSTER Consortium RNAseq PBMC Dataset of healthy control cohort

This is the RNAseq PBMC dataset (paired FASTQ files, n = 37 paired files) generated from healthy donor cohort samples. Demographic dataset is also included in this dataset. Samples were sequenced on the NovaSeq6000 instrument (Illumina, San Diego, US) at 300pM, using a 100bp paired read run with corresponding 8bp dual sample index and 5bp or 8bp unique molecular index reads. Run data were demultiplexed and converted to FASTQ files using Illumina’s BCL Convert Software v3.75.

Request Access

DUO:0000026
version: 2021-02-23

user specific restriction

This data use modifier indicates that use is limited to use by approved users.

DUO:0000027
version: 2021-02-23

project specific restriction

This data use modifier indicates that use is limited to use within an approved project.

DUO:0000028
version: 2021-02-23

institution specific restriction

This data use modifier indicates that use is limited to use within an approved institution.

DUO:0000042
version: 2021-02-23

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

CLUSTER Consortium Data Access Policy

Access to CLUSTER datasets is controlled. Please only click the "Request Access" button on the EGA website after a Data Access Agreement is sent to the CLUSTER Consortium. The DAA form can be found through the CLUSTER Consortium Data Access Policy URL link. Alternatively, please go to: https://zenodo.org/records/17856897 to find the form.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001439 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000502367 xlsx 19.4 kB
EGAF50000502376 fastq.gz 823.7 MB
EGAF50000502377 fastq.gz 787.8 MB
EGAF50000502386 fastq.gz 2.5 GB
EGAF50000502387 fastq.gz 2.6 GB
EGAF50000502396 fastq.gz 4.0 GB
EGAF50000502398 fastq.gz 4.1 GB
EGAF50000502400 fastq.gz 3.5 GB
EGAF50000502401 fastq.gz 3.7 GB
EGAF50000502410 fastq.gz 886.0 MB
EGAF50000502411 fastq.gz 918.2 MB
EGAF50000502420 fastq.gz 6.6 GB
EGAF50000502421 fastq.gz 6.9 GB
EGAF50000502422 fastq.gz 2.5 GB
EGAF50000502423 fastq.gz 2.6 GB
EGAF50000502446 fastq.gz 2.1 GB
EGAF50000502447 fastq.gz 2.2 GB
EGAF50000502455 fastq.gz 699.6 MB
EGAF50000502457 fastq.gz 719.7 MB
EGAF50000502466 fastq.gz 2.7 GB
EGAF50000502467 fastq.gz 2.8 GB
EGAF50000502474 fastq.gz 2.0 GB
EGAF50000502475 fastq.gz 2.0 GB
EGAF50000502490 fastq.gz 1.7 GB
EGAF50000502491 fastq.gz 1.7 GB
EGAF50000502496 fastq.gz 2.4 GB
EGAF50000502497 fastq.gz 2.3 GB
EGAF50000502506 fastq.gz 908.0 MB
EGAF50000502507 fastq.gz 929.9 MB
EGAF50000502516 fastq.gz 2.0 GB
EGAF50000502517 fastq.gz 2.0 GB
EGAF50000502520 fastq.gz 2.0 GB
EGAF50000502521 fastq.gz 2.0 GB
EGAF50000502530 fastq.gz 1.6 GB
EGAF50000502531 fastq.gz 1.6 GB
EGAF50000502536 fastq.gz 1.6 GB
EGAF50000502537 fastq.gz 1.6 GB
EGAF50000502545 fastq.gz 1.6 GB
EGAF50000502547 fastq.gz 1.6 GB
EGAF50000502556 fastq.gz 3.8 GB
EGAF50000502557 fastq.gz 3.8 GB
EGAF50000502566 fastq.gz 1.8 GB
EGAF50000502567 fastq.gz 1.8 GB
EGAF50000502575 fastq.gz 1.8 GB
EGAF50000502576 fastq.gz 1.8 GB
EGAF50000502585 fastq.gz 1.8 GB
EGAF50000502586 fastq.gz 1.8 GB
EGAF50000502595 fastq.gz 1.8 GB
EGAF50000502596 fastq.gz 1.8 GB
EGAF50000502605 fastq.gz 1.9 GB
EGAF50000502606 fastq.gz 1.9 GB
EGAF50000502614 fastq.gz 1.8 GB
EGAF50000502616 fastq.gz 1.9 GB
EGAF50000502625 fastq.gz 1.9 GB
EGAF50000502626 fastq.gz 1.9 GB
EGAF50000502635 fastq.gz 1.7 GB
EGAF50000502636 fastq.gz 1.7 GB
EGAF50000502637 fastq.gz 3.6 GB
EGAF50000502638 fastq.gz 3.6 GB
EGAF50000502649 fastq.gz 1.5 GB
EGAF50000502650 fastq.gz 1.6 GB
EGAF50000502657 fastq.gz 1.3 GB
EGAF50000502658 fastq.gz 1.3 GB
EGAF50000502667 fastq.gz 1.9 GB
EGAF50000502668 fastq.gz 1.9 GB
EGAF50000502677 fastq.gz 1.7 GB
EGAF50000502678 fastq.gz 1.7 GB
EGAF50000502687 fastq.gz 2.4 GB
EGAF50000502689 fastq.gz 2.4 GB
EGAF50000502696 fastq.gz 2.1 GB
EGAF50000502698 fastq.gz 2.1 GB
EGAF50000502707 fastq.gz 2.2 GB
EGAF50000502708 fastq.gz 2.3 GB
EGAF50000502710 fastq.gz 2.9 GB
EGAF50000502711 fastq.gz 3.1 GB
75 Files (161.5 GB)