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As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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CLUSTER Consortium RNAseq CD4 Dataset of healthy control cohort

This is the RNAseq CD4 dataset (paired FASTQ files, n = 37 paired files) generated from healthy donor cohort samples. CD4 cells were sorted from isolated total PBMC by cell sorter (BD FACSAriaTM III, BD Biosciences). Demographic dataset is also included in this dataset. Samples were sequenced on the NovaSeq6000 instrument (Illumina, San Diego, US) at 300pM, using a 100bp paired read run with corresponding 8bp dual sample index and 5bp or 8bp unique molecular index reads. Run data were demultiplexed and converted to FASTQ files using Illumina’s BCL Convert Software v3.75.

Request Access

DUO:0000026
version: 2021-02-23

user specific restriction

This data use modifier indicates that use is limited to use by approved users.

DUO:0000027
version: 2021-02-23

project specific restriction

This data use modifier indicates that use is limited to use within an approved project.

DUO:0000028
version: 2021-02-23

institution specific restriction

This data use modifier indicates that use is limited to use within an approved institution.

DUO:0000042
version: 2021-02-23

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

CLUSTER Consortium Data Access Policy

Access to CLUSTER datasets is controlled. Please only click the "Request Access" button on the EGA website after a Data Access Agreement is sent to the CLUSTER Consortium. The DAA form can be found through the CLUSTER Consortium Data Access Policy URL link. Alternatively, please go to: https://zenodo.org/records/17856897 to find the form.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001439 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000502367 xlsx 19.4 kB
EGAF50000502372 fastq.gz 1.6 GB
EGAF50000502373 fastq.gz 1.7 GB
EGAF50000502382 fastq.gz 2.0 GB
EGAF50000502383 fastq.gz 2.0 GB
EGAF50000502392 fastq.gz 4.2 GB
EGAF50000502393 fastq.gz 4.4 GB
EGAF50000502397 fastq.gz 2.5 GB
EGAF50000502399 fastq.gz 2.6 GB
EGAF50000502406 fastq.gz 2.6 GB
EGAF50000502407 fastq.gz 2.7 GB
EGAF50000502416 fastq.gz 1.5 GB
EGAF50000502417 fastq.gz 1.6 GB
EGAF50000502424 fastq.gz 2.9 GB
EGAF50000502425 fastq.gz 3.1 GB
EGAF50000502434 fastq.gz 4.3 GB
EGAF50000502435 fastq.gz 4.5 GB
EGAF50000502441 fastq.gz 656.9 MB
EGAF50000502443 fastq.gz 674.7 MB
EGAF50000502452 fastq.gz 725.1 MB
EGAF50000502453 fastq.gz 746.8 MB
EGAF50000502462 fastq.gz 1.1 GB
EGAF50000502463 fastq.gz 1.1 GB
EGAF50000502468 fastq.gz 2.6 GB
EGAF50000502469 fastq.gz 2.7 GB
EGAF50000502470 fastq.gz 2.8 GB
EGAF50000502471 fastq.gz 2.9 GB
EGAF50000502486 fastq.gz 1.4 GB
EGAF50000502487 fastq.gz 1.5 GB
EGAF50000502492 fastq.gz 1.2 GB
EGAF50000502493 fastq.gz 1.3 GB
EGAF50000502502 fastq.gz 2.2 GB
EGAF50000502503 fastq.gz 2.3 GB
EGAF50000502512 fastq.gz 2.1 GB
EGAF50000502513 fastq.gz 2.1 GB
EGAF50000502522 fastq.gz 1.5 GB
EGAF50000502523 fastq.gz 1.5 GB
EGAF50000502532 fastq.gz 1.6 GB
EGAF50000502533 fastq.gz 1.5 GB
EGAF50000502538 fastq.gz 1.9 GB
EGAF50000502540 fastq.gz 1.9 GB
EGAF50000502548 fastq.gz 1.6 GB
EGAF50000502549 fastq.gz 1.6 GB
EGAF50000502558 fastq.gz 3.6 GB
EGAF50000502560 fastq.gz 3.6 GB
EGAF50000502568 fastq.gz 1.8 GB
EGAF50000502570 fastq.gz 1.9 GB
EGAF50000502577 fastq.gz 2.0 GB
EGAF50000502578 fastq.gz 2.0 GB
EGAF50000502587 fastq.gz 2.0 GB
EGAF50000502588 fastq.gz 2.0 GB
EGAF50000502597 fastq.gz 1.5 GB
EGAF50000502598 fastq.gz 1.5 GB
EGAF50000502607 fastq.gz 1.9 GB
EGAF50000502608 fastq.gz 2.0 GB
EGAF50000502617 fastq.gz 1.9 GB
EGAF50000502618 fastq.gz 1.9 GB
EGAF50000502627 fastq.gz 1.8 GB
EGAF50000502628 fastq.gz 1.8 GB
EGAF50000502639 fastq.gz 3.8 GB
EGAF50000502641 fastq.gz 3.8 GB
EGAF50000502647 fastq.gz 2.0 GB
EGAF50000502648 fastq.gz 2.1 GB
EGAF50000502651 fastq.gz 1.5 GB
EGAF50000502652 fastq.gz 1.5 GB
EGAF50000502659 fastq.gz 1.3 GB
EGAF50000502660 fastq.gz 1.4 GB
EGAF50000502669 fastq.gz 1.8 GB
EGAF50000502670 fastq.gz 1.9 GB
EGAF50000502683 fastq.gz 2.3 GB
EGAF50000502684 fastq.gz 2.3 GB
EGAF50000502693 fastq.gz 2.3 GB
EGAF50000502694 fastq.gz 2.3 GB
EGAF50000502703 fastq.gz 2.2 GB
EGAF50000502705 fastq.gz 2.3 GB
75 Files (155.3 GB)