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As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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CLUSTER Consortium RNAseq CD14 Dataset of healthy control cohort

This is the RNAseq CD14 dataset (paired FASTQ files, n = 31 paired files) generated from healthy donor cohort samples. CD14 cells were sorted from isolated total PBMC by cell sorter (BD FACSAriaTM III, BD Biosciences). Demographic dataset is also included in this dataset. Samples were sequenced on the NovaSeq6000 instrument (Illumina, San Diego, US) at 300pM, using a 100bp paired read run with corresponding 8bp dual sample index and 5bp or 8bp unique molecular index reads. Run data were demultiplexed and converted to FASTQ files using Illumina’s BCL Convert Software v3.75.

Request Access

DUO:0000026
version: 2021-02-23

user specific restriction

This data use modifier indicates that use is limited to use by approved users.

DUO:0000027
version: 2021-02-23

project specific restriction

This data use modifier indicates that use is limited to use within an approved project.

DUO:0000028
version: 2021-02-23

institution specific restriction

This data use modifier indicates that use is limited to use within an approved institution.

DUO:0000042
version: 2021-02-23

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

CLUSTER Consortium Data Access Policy

Access to CLUSTER datasets is controlled. Please only click the "Request Access" button on the EGA website after a Data Access Agreement is sent to the CLUSTER Consortium. The DAA form can be found through the CLUSTER Consortium Data Access Policy URL link. Alternatively, please go to: https://zenodo.org/records/17856897 to find the form.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001439 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000502367 xlsx 19.4 kB
EGAF50000502368 fastq.gz 2.7 GB
EGAF50000502369 fastq.gz 2.8 GB
EGAF50000502378 fastq.gz 2.7 GB
EGAF50000502379 fastq.gz 2.8 GB
EGAF50000502388 fastq.gz 4.7 GB
EGAF50000502389 fastq.gz 4.9 GB
EGAF50000502402 fastq.gz 3.0 GB
EGAF50000502403 fastq.gz 3.2 GB
EGAF50000502412 fastq.gz 5.7 GB
EGAF50000502413 fastq.gz 5.9 GB
EGAF50000502426 fastq.gz 3.4 GB
EGAF50000502427 fastq.gz 3.6 GB
EGAF50000502430 fastq.gz 3.1 GB
EGAF50000502431 fastq.gz 3.2 GB
EGAF50000502438 fastq.gz 1.7 GB
EGAF50000502439 fastq.gz 1.7 GB
EGAF50000502448 fastq.gz 936.9 MB
EGAF50000502449 fastq.gz 958.2 MB
EGAF50000502458 fastq.gz 2.2 GB
EGAF50000502459 fastq.gz 2.2 GB
EGAF50000502476 fastq.gz 2.7 GB
EGAF50000502477 fastq.gz 2.8 GB
EGAF50000502482 fastq.gz 3.4 GB
EGAF50000502483 fastq.gz 3.5 GB
EGAF50000502498 fastq.gz 2.6 GB
EGAF50000502499 fastq.gz 2.7 GB
EGAF50000502508 fastq.gz 2.2 GB
EGAF50000502509 fastq.gz 2.2 GB
EGAF50000502526 fastq.gz 1.7 GB
EGAF50000502527 fastq.gz 1.7 GB
EGAF50000502542 fastq.gz 1.7 GB
EGAF50000502543 fastq.gz 1.8 GB
EGAF50000502552 fastq.gz 1.8 GB
EGAF50000502553 fastq.gz 1.9 GB
EGAF50000502562 fastq.gz 3.3 GB
EGAF50000502564 fastq.gz 3.4 GB
EGAF50000502571 fastq.gz 1.8 GB
EGAF50000502572 fastq.gz 1.9 GB
EGAF50000502581 fastq.gz 1.7 GB
EGAF50000502582 fastq.gz 1.7 GB
EGAF50000502591 fastq.gz 2.0 GB
EGAF50000502592 fastq.gz 2.1 GB
EGAF50000502601 fastq.gz 1.6 GB
EGAF50000502602 fastq.gz 1.6 GB
EGAF50000502611 fastq.gz 2.0 GB
EGAF50000502612 fastq.gz 2.1 GB
EGAF50000502621 fastq.gz 2.1 GB
EGAF50000502623 fastq.gz 2.1 GB
EGAF50000502630 fastq.gz 1.7 GB
EGAF50000502633 fastq.gz 1.7 GB
EGAF50000502642 fastq.gz 1.8 GB
EGAF50000502644 fastq.gz 1.8 GB
EGAF50000502663 fastq.gz 1.7 GB
EGAF50000502664 fastq.gz 1.7 GB
EGAF50000502673 fastq.gz 1.4 GB
EGAF50000502674 fastq.gz 1.4 GB
EGAF50000502679 fastq.gz 2.7 GB
EGAF50000502680 fastq.gz 2.8 GB
EGAF50000502688 fastq.gz 2.1 GB
EGAF50000502690 fastq.gz 2.1 GB
EGAF50000502699 fastq.gz 2.1 GB
EGAF50000502701 fastq.gz 2.1 GB
63 Files (150.6 GB)